EY684289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.109e-78 Identity = 145/163 (88.96%), Postives = 148/163 (90.80%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV*LC*PLP 539 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVCKGIF D VADDD+V L P Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFP 338
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 9.887e-78 Identity = 138/163 (84.66%), Postives = 145/163 (88.96%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV*LC*PLP 539 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGR+GGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPI+VTG DFSTL APLI DGRM+KFYWAPTREDRIG+C GIF D V +D+V L P Sbjct: 173 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFP 335 HSP 2 Score: 32.3426 bits (72), Expect = 9.887e-78 Identity = 25/54 (46.30%), Postives = 31/54 (57.41%), Query Frame = 1 Query: 526 VDPFPGLSH*FP*SP*RAIIDDDVVKKLDPWVLGVG--KNWKNLVKSKETNSTF 681 VD FPG S F RA + DD V+K W +GVG + +NLV SKE+ TF Sbjct: 331 VDTFPGQSIDFF-GALRARVYDDEVRK---WAVGVGVERIGRNLVNSKESPPTF 380
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.660e-77 Identity = 140/156 (89.74%), Postives = 145/156 (92.95%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV 518 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVCKGIF D V ++D+V Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIV 331
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 286.96 bits (733), Expect = 1.038e-76 Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV 518 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPI+VTG DFSTL APLI DGRMEKFYWAPTR+DR+GVCKGIF D V D+D+V Sbjct: 167 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIV 322
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 1.148e-75 Identity = 139/163 (85.28%), Postives = 145/163 (88.96%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV*LC*PLP 539 ELV KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPI+ TG DFSTL APLI DGRMEKFYWAPTREDRIGVCKGIF DK+ D+D+V L P Sbjct: 176 ELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFP 338
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.696e-75 Identity = 137/156 (87.82%), Postives = 143/156 (91.67%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV 518 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTG DFSTL APLI DGRMEKFYWAPTR+DRIGVCKGIF D V+D+ VV Sbjct: 166 ELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVV 321
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 3.692e-74 Identity = 137/156 (87.82%), Postives = 142/156 (91.03%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV 518 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVCKGIF D V ++ VV Sbjct: 175 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVV 330
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.822e-74 Identity = 139/163 (85.28%), Postives = 145/163 (88.96%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV*LC*PLP 539 ELVF KM I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDAGAGR+GGTT YTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVC GIF +D VA +D+V L P Sbjct: 176 ELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFP 338
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 6.298e-74 Identity = 137/156 (87.82%), Postives = 141/156 (90.38%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV 518 ELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVC GIF D V +DVV Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVV 335
BLAST of EY684289 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 8.225e-74 Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 3 Query: 51 ELVFTKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTHYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPILVTGKDFSTL*APLIPDGRMEKFYWAPTREDRIGVCKGIFMNDKVADDDVV*LC*PLP 539 ELVF KMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTT YTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPI+VTG DFSTL APLI DGRMEKFYWAPTREDRIGVCKGIF D V D+ VV L P Sbjct: 164 ELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFP 325 The following BLAST results are available for this feature:
BLAST of EY684289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684289 ID=EY684289; Name=EY684289; organism=Citrus sinensis; type=EST; length=909bpback to top |