EY684286

Overview
NameEY684286
Unique NameEY684286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684286 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.566e-14
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1 
Query:   10 NVAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 201
            NV +GSPP   CC++L GL  +EAA+CLC AIKAN+L   LN P  + L+L+ C + +P GF+C
Sbjct:   73 NVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136
[Close]
BLAST of EY684286 vs. ExPASy Swiss-Prot
Match: CCDP_MAIZE (Cortical cell-delineating protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.311e-13
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1 
Query:   13 VAVGSPPYSQCCAILGGLGEVEAALCLCLAIKANVLAIELNWPTNIGLILSLCNRPIPAGFKC 201
            V VG P Y QCC +L GL +++AALCLC AIKANVL I LN P ++  IL+ C R  P  F C
Sbjct:   65 VKVGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127
The following BLAST results are available for this feature:
BLAST of EY684286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
14KD_DAUCA3.566e-1451.5614 kDa proline-rich protein DC2.15 OS=Daucus carot... [more]
CCDP_MAIZE2.311e-1355.56Cortical cell-delineating protein OS=Zea mays PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-C06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684286 ID=EY684286; Name=EY684286; organism=Citrus sinensis; type=EST; length=436bp
CTTGGAACTAATGTTGCTGTAGGAAGCCCACCTTACAGCCAGTGCTGTGC
TATACTTGGCGGCTTGGGTGAAGTCGAAGCTGCGCTGTGTCTTTGCCTTG
CTATAAAAGCCAATGTTCTTGCGATTGAATTGAACTGGCCAACTAATATT
GGGCTCATCCTTAGTCTTTGCAACAGGCCAATTCCCGCAGGCTTCAAATG
TGCATAAGAAGCTGAAATGCATATTTCTAGTAAATTAATGCTCCAATTAA
CTAGGAAGAGATTTTTTTTTTTTTTTTTTTTTGTTGGGTCTATTTCTAGT
ACCGTGTACGTTCATTGTTTTAATTTGCTAATAACTATGCAAGACTGGTT
GCCTATGCTAGTTGTGATGTGTGTACGCATTAATGTTGTGACTTAATTAA
TAATTAAAATCAATCTTCTTTAAAAAAAAAAAAAAA
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