EY684285

Overview
NameEY684285
Unique NameEY684285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: SP39_RHIME (Probable sugar-binding periplasmic protein OS=Rhizobium meliloti GN=R03301 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.881e-55
Identity = 109/240 (45.42%), Postives = 146/240 (60.83%), Query Frame = 3
Query:   33 VAKANHWDSLLPESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGVPKAPATLEELYAAGDKLKAAGFIAIAHGGQPWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAMFKPSTKNDTPGTMAARDDLAQNPPEPAISRTVSNQKKRVPSR 752
            VA    WD ++P ++ Q  K+DGH++A P+N+H  NW+WIN   L KAG  K P T EEL A  DK K  G   IAHGGQPWQD T+F+ +VLS LG D +++AFID D A   G KM E F  + KL++Y+D N +G+DWN+ +A VI  +AG+Q MGDWAK E+  A K  G D+ C+ FPG+QG  ++  D  AMFK S        + A+  +A     PA     +  K  VP+R
Sbjct:  107 VAAKEGWDKVVPAALQQFSKYDGHWIAAPVNVHSTNWVWINKAALDKAGA-KEPTTWEELIALLDKFKEQGITPIAHGGQPWQDATIFDAVVLS-LGNDFYKQAFIDLDPAALGGDKMKEAFDRMTKLRSYVDDNFSGRDWNLASAMVIENKAGLQFMGDWAKGEFLKAKKVPGTDFVCMRFPGTQGSVTFNSDQFAMFKVSEDK-----VPAQLQMASAIESPAFQSAFNVVKGSVPAR 339          
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: SP39_BRUSU (Probable sugar-binding periplasmic protein OS=Brucella suis GN=BRA0693 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.365e-53
Identity = 104/240 (43.33%), Postives = 143/240 (59.58%), Query Frame = 3
Query:   33 VAKANHWDSLLPESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGVPKAPATLEELYAAGDKLKAAGFIAIAHGGQPWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAMFKPSTKNDTPGTMAARDDLAQNPPEPAISRTVSNQKKRVPSR 752
            VA    W+ ++P  + +  K+DGH++A P+NIH  NW+WIN   L KAG  K P   +EL A  D  KA G   IAHGGQPWQD T+F+ +VLS  G D ++KAFID D        M + F  + KL+TY+D N +G+DWN+ +A VI G+AG+Q MGDWAK E+  AGKK G D+ C+ +PG+QG  ++  D  AMFK S        + A+ ++A     PA     +  K   P+R
Sbjct:  114 VASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDKAG-GKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSF-GPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLRTYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDK-----VPAQLEMASAIESPAFQSAFNVVKGSAPAR 346          
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: SP39_BRUME (Probable sugar-binding periplasmic protein OS=Brucella melitensis GN=BMEII0590 PE=3 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 6.365e-53
Identity = 104/240 (43.33%), Postives = 143/240 (59.58%), Query Frame = 3
Query:   33 VAKANHWDSLLPESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGVPKAPATLEELYAAGDKLKAAGFIAIAHGGQPWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAMFKPSTKNDTPGTMAARDDLAQNPPEPAISRTVSNQKKRVPSR 752
            VA    W+ ++P  + +  K+DGH++A P+NIH  NW+WIN   L KAG  K P   +EL A  D  KA G   IAHGGQPWQD T+F+ +VLS  G D ++KAFID D        M + F  + KL+TY+D N +G+DWN+ +A VI G+AG+Q MGDWAK E+  AGKK G D+ C+ +PG+QG  ++  D  AMFK S        + A+ ++A     PA     +  K   P+R
Sbjct:  114 VASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDKAG-GKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSF-GPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLRTYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDK-----VPAQLEMASAIESPAFQSAFNVVKGSAPAR 346          
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: SP39_BRUAB (Probable sugar-binding periplasmic protein OS=Brucella abortus GN=BruAb2_0537 PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 6.365e-53
Identity = 104/240 (43.33%), Postives = 143/240 (59.58%), Query Frame = 3
Query:   33 VAKANHWDSLLPESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGVPKAPATLEELYAAGDKLKAAGFIAIAHGGQPWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAMFKPSTKNDTPGTMAARDDLAQNPPEPAISRTVSNQKKRVPSR 752
            VA    W+ ++P  + +  K+DGH++A P+NIH  NW+WIN   L KAG  K P   +EL A  D  KA G   IAHGGQPWQD T+F+ +VLS  G D ++KAFID D        M + F  + KL+TY+D N +G+DWN+ +A VI G+AG+Q MGDWAK E+  AGKK G D+ C+ +PG+QG  ++  D  AMFK S        + A+ ++A     PA     +  K   P+R
Sbjct:  114 VASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDKAG-GKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSF-GPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLRTYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDK-----VPAQLEMASAIESPAFQSAFNVVKGSAPAR 346          
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: SP39_RHILO (Probable sugar-binding periplasmic protein OS=Rhizobium loti GN=mlr3050 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.842e-46
Identity = 90/198 (45.45%), Postives = 124/198 (62.63%), Query Frame = 3
Query:   36 AKANHWDSLLPESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGVPKAPATLEELYAAGDKLKAAGFIAIAHGGQPWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAMF 629
            AK   WD  +P ++ +   ++G +VA P+N+H +NWLWIN  V+ K G  + P T ++  A  DK KAAG I +A GGQ WQ+ T+F+ +VLS  G + ++KAF D D+A+     M + F  L KL TY+DPN +G+DWN+ TA VI G A +Q+MGDWAK E+ AA K  G D+ C  FPG+ G   Y  D   MF
Sbjct:  109 AKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMDKIGGTE-PKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAKLVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMF 305          
BLAST of EY684285 vs. ExPASy Swiss-Prot
Match: Y1214_PYRHO (Uncharacterized ABC transporter extracellular-binding protein PH1214 OS=Pyrococcus horikoshii GN=PH1214 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.409e-29
Identity = 80/254 (31.50%), Postives = 126/254 (49.61%), Query Frame = 3
Query:   66 PESIAQLMKFDGHYVAVPLNIHRINWLWINPEVLKKAGV-PKAPATLEELYAAGDKLKAAGFIAIAHGGQ-PWQDTTVFEGLVLSILGADGFQKAFIDNDEATFTGPKMTEVFVALRKLKTYMDPNGAGQDWNMETAKVINGQAGMQIMGDWAKSEWTAAGKKAGADYECVPFPGSQGIYSYTIDSLAM--------------------FKPSTKNDTPGTMAARDDLAQNPPEPA----ISRTVSNQKKRVPS 749
            P+ I Q++ F+ HY AVP+N+HR N +W N ++ KK G+ P +  T+++L+A  +KLK  G    A G +  W  T VFE +++++ G D ++K FI N E +   P + +V     K   Y +P+ A + W+   A V  G+A M +MGDWA   + A G K   DY  +P P   G+Y   ID+  +                       +T N   G++  R D   +P +P     I    S++ K +PS
Sbjct:  138 PKVIQQMVIFNNHYYAVPINVHRANVIWYNKQIFKKYGIDPSSIKTIDDLFAVAEKLKENGVTPFALGDRNKWPATQVFEVMLVAVGGVDYYEK-FI-NGEISANDPTLKKVLEYFVKYVEYSNPDHAAKTWDEACALVYKGEAAMTLMGDWANGYFKAKGWKPNVDYGAIPIPA--GVYDLVIDTFVLPAKAAHPNAAKKWLSFIGTVEAQNTFNPIKGSIPPRKDAPADPYDPIQKSFIKELSSSETKLIPS 387          
The following BLAST results are available for this feature:
BLAST of EY684285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
SP39_RHIME8.881e-5545.42Probable sugar-binding periplasmic protein OS=Rhiz... [more]
SP39_BRUSU6.365e-5343.33Probable sugar-binding periplasmic protein OS=Bruc... [more]
SP39_BRUME6.365e-5343.33Probable sugar-binding periplasmic protein OS=Bruc... [more]
SP39_BRUAB6.365e-5343.33Probable sugar-binding periplasmic protein OS=Bruc... [more]
SP39_RHILO9.842e-4645.45Probable sugar-binding periplasmic protein OS=Rhiz... [more]
Y1214_PYRHO6.409e-2931.50Uncharacterized ABC transporter extracellular-bind... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-C05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684285 ID=EY684285; Name=EY684285; organism=Citrus sinensis; type=EST; length=935bp
GGTCCGGGGTCCGGGAATTCCCGGGTCGACACGTCGCCAAGGCCAATCAC
TGGGACAGCCTGCTGCCCGAAAGCATTGCGCAACTGATGAAATTCGACGG
CCACTACGTCGCCGTGCCGCTCAACATCCACCGCATCAACTGGTTATGGA
TCAACCCCGAGGTGCTTAAGAAAGCCGGCGTGCCCAAAGCCCCGGCCACC
CTGGAAGAACTCTACGCCGCCGGCGACAAACTCAAGGCCGCCGGCTTCAT
CGCCATCGCCCACGGCGGCCAACCCTGGCAGGACACCACCGTATTTGAAG
GCCTGGTGCTCAGCATCCTGGGTGCCGATGGCTTTCAGAAAGCCTTTATC
GACAACGACGAAGCCACCTTCACCGGCCCCAAAATGACCGAAGTCTTTGT
CGCGCTGCGCAAGCTGAAGACCTACATGGACCCCAACGGCGCAGGCCAGG
ACTGGAACATGGAAACCGCCAAAGTCATCAATGGCCAGGCCGGCATGCAA
ATCATGGGGGACTGGGCCAAGAGTGAGTGGACCGCGGCGGGTAAAAAAGC
CGGGGCCGATTATGAATGCGTGCCCTTTCCCGGCTCACAAGGCATTTATA
GCTACACCATCGACTCACTGGCCATGTTCAAACCCTCCACCAAAAACGAT
ACGCCAGGCACAATGGCGGCTCGCGACGACCTGGCCCAAAACCCCCCTGA
ACCCGCCATTTCCCGAACCGTGTCCAACCAAAAAAAAAGGGTTCCATCCC
GGGGGATTAAGGGGGCGGGAAAATGAACCCAATTTCAACGGCCTGGCCCC
CGGCTTTCCCCCAAAAAATTTCCCCAAAACCCCAAAAACCGCCGGGCCCC
TTGGAAACCCAACAATGGGCCTTCAAACTTGTCCCATTCCCCAGGGGGGG
GGGCAAGGGGGGGGGGGTTTTAGAGGGTGGGCCCA
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