EY684282

Overview
NameEY684282
Unique NameEY684282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.532e-46
Identity = 84/127 (66.14%), Postives = 98/127 (77.17%), Query Frame = 1
Query:   40 SGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSIIGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIFSP 420
            +GESG LRN+G +PV YRR  CKY GKNIAFHV+E  T++WLSLLVEFEDG+GD+GSMHIR+A +REWL M HVWGANW IIGGPL+GPF              A DV+P NW+P+ATYSSRL FSP
Sbjct:  136 AGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFSP 262          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.390e-41
Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 1
Query:   43 GESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSIIGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIFSP 420
            G +G +RN+G L + YRR  CKY GKNIAFHV+   T+YWLSLL+E+EDG+GD+GSMHIR+A S+EW+ M H+WGANW I+ GPL+GPF              A DVIP+NW P+ATY+SRL FSP
Sbjct:  144 GHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNFSP 269          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.008e-39
Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 1
Query:   40 SGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSIIGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIFS 417
            +G  G+L+N+GE+ V YRR  CKY GKNIAFHV+E  T +WLSLLVEFEDGDGD+GSM +++A S +W  M H+WGA WS+  GPL GPF              A+DVIP NW+P+ATY+SRL F+
Sbjct:  147 AGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYTSRLNFA 272          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.039e-38
Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 1
Query:   40 SGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSIIGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIF 414
            +G  G LR++G+L V YRR  CKY GKNIAF V+E  TN+WLSLLVEFEDG GD+GSM I++A S EWL M HVWGA W ++ GPL GPF              ARDVIP NW P ATY+SRL F
Sbjct:  150 AGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSRLNF 274          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.906e-18
Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 1
Query:   25 GVTHTSGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREA-RSREWLHMNHVWGANWSI-IGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIF 414
            G    SG+  +LRN GEL + Y++  C Y GK + F V +       ++LV + +GDG++G + +++A  S +WL M+  WGA W + +  PL+ P               A +VIP NW P A Y S + F
Sbjct:  142 GAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.519e-17
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 1
Query:   25 GVTHTSGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSIIGG-PLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIFS 417
            G     G++ +LR+ G + + ++R PC +PG  + FHV E     + ++LVE+EDGDGDV  + + EA S+ W  M   WG+ W +     L  PF              A  VIP NW+P A Y S + +S
Sbjct:  137 GAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTAPF-SLRITNESGKQLVASQVIPANWAPMAVYRSFVQYS 267          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.591e-17
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 1
Query:    4 DGTSRNSGVTHTSGESGELRNQGELPVFYRRAPCKYP-GKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSI-IGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIF 414
            D + +  G     G+  +LR  GEL + +RR  CKYP G  I FH+ +   +++L+LLV++  GDG++ ++ I+   S E++ M   WGA W I    PL+GPF                DVIP NW P+  Y+S+L F
Sbjct:  107 DLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKGPF-SIRLTSEGGAHLVQDDVIPANWKPDTVYTSKLQF 244          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.420e-17
Identity = 51/136 (37.50%), Postives = 67/136 (49.26%), Query Frame = 1
Query:   25 GVTHTSGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSR----EWLHMNHVWGANWSIIGG--PLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIF 414
            G     G+  +LRN G+LPV Y R PCK+ G +IAF V      Y+L++LVE EDGDGD+ ++ + ++        W  M   WGA W    G  PLQ P               A +VIP  W P  TY S + F
Sbjct:  135 GAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPAPLQAPM-SIRLTSGSGRTLVASNVIPAGWQPGGTYRSIVNF 269          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.773e-17
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 1
Query:   25 GVTHTSGESGELRNQGELPVFYRRAPCKYPGKN-IAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANWSI-IGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRL 408
            G     G+  ELR  G + + +RR  CKYPG+  + FHV +     + ++LV++  GDGDV  + ++E  S EW  +N  WGA W I    PL+GPF              A DVIP+NW   A Y S +
Sbjct:  136 GAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLKGPF-SLRVTTESDQKLVANDVIPDNWKANALYKSEI 264          
BLAST of EY684282 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.847e-17
Identity = 53/141 (37.59%), Postives = 71/141 (50.35%), Query Frame = 1
Query:    4 DGTSRNSGVTHTSGESGELRNQGELPVFYRRAPCKYPGKNIAFHVHESYTNYWLSLLVEFEDGDGDVGSMHIREARSREWLHMNHVWGANW---SIIGGPLQGPFXXXXXXXXXXXXXXARDVIPNNWSPEATYSSRLIFS 417
            D +  + G     G + +LR  G L V YRR PCKY G NIAF V +    ++  +L+EFEDGDGD+ ++ + EA    W  M   WGA W   S  G  L+ PF              A +VIP +W P  TY S + +S
Sbjct:  154 DMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEA-GCGWTPMVQNWGALWRYNSNTGKALKAPF-SLRLTSDSGKVLVANNVIPASWKPGVTYRSLVNYS 292          
The following BLAST results are available for this feature:
BLAST of EY684282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
EXPB3_ARATH4.532e-4666.14Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 ... [more]
EXPB1_ARATH4.390e-4158.73Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 ... [more]
EXB16_ORYSJ7.008e-3956.35Expansin-B16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB17_ORYSJ2.039e-3859.20Expansin-B17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPB2_ARATH8.906e-1834.09Putative expansin-B2 OS=Arabidopsis thaliana GN=EX... [more]
EXPB3_ORYSJ1.519e-1734.85Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
MPAC1_CYNDA2.591e-1735.97Major pollen allergen Cyn d 1 OS=Cynodon dactylon ... [more]
EXB14_ORYSJ4.420e-1737.50Putative expansin-B14 OS=Oryza sativa subsp. japon... [more]
EXB10_ORYSJ5.773e-1736.92Expansin-B10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB11_ORYSJ9.847e-1737.59Expansin-B11 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-C02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684282 ID=EY684282; Name=EY684282; organism=Citrus sinensis; type=EST; length=949bp
AACGACGGTACGAGTCGGAATTCCGGGGTCACCCACACGTCAGGTGAGAG
TGGCGAGCTCCGTAACCAAGGCGAGCTCCCAGTCTTCTATAGACGGGCCC
CATGTAAATATCCTGGGAAGAATATTGCGTTCCATGTGCATGAAAGTTAC
ACAAATTATTGGCTTTCCCTTTTGGTGGAATTTGAAGATGGAGATGGTGA
TGTTGGCTCAATGCACATAAGGGAGGCACGTTCACGTGAGTGGCTGCATA
TGAATCATGTATGGGGTGCAAATTGGTCTATTATTGGGGGACCGTTACAA
GGACCATTCTCTCTGAAACTAACAACATTATCAACATGAAGAACCCTCTC
GGCCAGGGATGTCATTCCAAACAATTGGTCACCAGAAGCAACTTACTCTT
CTCGCCTCATCTTCTCTCCCTCAAATAATATCATTGGTGGAGAAATGCAC
AAACAATTTTTTCTTGATAACACTGAATTAACTTTTAAGTCAAAACTACG
TATACCTTTGCCACCACATTTTTAACGGATGGGTTTATTCCAATAATACA
TTTTGAAAGAAAAACTAAAAATATGGAAGTCGTGCAAAACACCCAGGGAT
CTTATCCAAGTNTCGGAATTAGCCCCAATAAAAAAGTGTGAAACTAGAAC
AAAAATGTACACCCATCTCCCTAATGGGCAACGGGACAATAACAATTAGC
CGCTAACTTATACACTCCTCTGAGTGACACGAACACAAAACCTACAAAGG
ACGCAAGGTCCTTTCCTTAAAGATTCTATGTTCTATTCACACCTGTGATT
GCCACTTCAATAACTATTATATCAAAAGCTAGTCACAGCTGCTATCGTTA
TTAGCGGACAGTAGTGACAAGTTCTGTATGGGATGATGAGAATAGATAAT
TTAGATAGCAATGTAGATGTTGACAGATGAGGGAGATACATGAACAAAC
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