EY684278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 3.614e-95 Identity = 156/171 (91.23%), Postives = 166/171 (97.08%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG 528 G D V+KMILGTHTSENEPNYLMLAQVQLPL+D+ENDARHYDDDRS+FGGFGCANGKVQIIQQINHDGEVNRARYMPQNPF+IATKTVSAEVYVFDYSKHPSKPPLDGAC+PDLRLRGHSTEGYGLSWS+FK+GHLLSGSDD+ ICLWDINA PKNK+LEAMQIFKVHEG Sbjct: 58 GKDYSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEG 228 HSP 2 Score: 36.1946 bits (82), Expect = 3.614e-95 Identity = 36/101 (35.64%), Postives = 48/101 (47.52%), Query Frame = 3 Query: 555 LRPEYLFGSVGG*IQYPGLKWNLRKPPWNQPL-PICCPSPEWGLTA*PFNPFNGRIFGNGGLLEKTF*NYLI*PKKQPWLLHNI*TFQKKKFSSNWGGNPK 854 LR EYLFGSVG QY + W+LR P +P+ + E A FNPFN + G +KT L +K LH + +++ F W NPK Sbjct: 237 LRHEYLFGSVGD-DQYLHV-WDLRTPSVTKPIQSVVAHQSEVNCLA--FNPFNEWVVATGS-TDKTV--KLFDLRKISTALHTLDCHKEEVFQVGW--NPK 328
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 2.134e-92 Identity = 150/171 (87.72%), Postives = 163/171 (95.32%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG 528 G D V+KMILGTHTSE+EPNYLMLAQVQLPLDD+E++AR YDDDRS+FGGFGCA GKVQIIQQINHDGEVNRARYMPQNPF+IATKTV+AEVYVFDYSKHPSKPPLDGAC+PDL+LRGHS+EGYGLSWSKFK+GHLLSGSDDAQICLWDINA PKNKSL+A QIFK HEG Sbjct: 58 GKDYSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEG 228 HSP 2 Score: 38.891 bits (89), Expect = 2.134e-92 Identity = 38/101 (37.62%), Postives = 50/101 (49.50%), Query Frame = 3 Query: 555 LRPEYLFGSVGG*IQYPGLKWNLRKPPWNQPL-PICCPSPEWGLTA*PFNPFNGRIFGNGGLLEKTF*NYLI*PKKQPWLLHNI*TFQKKKFSSNWGGNPK 854 LR EYLFGSVG QY L W+LR P ++P+ + S E A FNPFN + G +KT L +K LH + +++ F W NPK Sbjct: 237 LRHEYLFGSVGD-DQYL-LIWDLRSPSASKPVQSVVAHSMEVNCLA--FNPFNEWVVATGS-TDKTV--KLFDLRKLSTALHTFDSHKEEVFQVGW--NPK 328
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 1.732e-55 Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4) HSP 1 Score: 216.468 bits (550), Expect = 1.732e-55 Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP-KNKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A P K K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_HUMAN (Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 1.732e-55 Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_CHICK (Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 1.732e-55 Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 1.732e-55 Identity = 103/170 (60.59%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3) HSP 1 Score: 213.772 bits (543), Expect = 1.123e-54 Identity = 102/170 (60.00%), Postives = 130/170 (76.47%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+LLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 1.467e-54 Identity = 102/170 (60.00%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+LLS SDD ICLWDI+A PK K ++A IF H Sbjct: 58 GKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
BLAST of EY684278 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.467e-54 Identity = 102/170 (60.00%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 16 GVDPRVRKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVH 522 G D + ++LGTHTS+ E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYMPQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHLLS SDD +CLWDI+A PK K ++A IF H Sbjct: 57 GKDYALHWLVLGTHTSD-EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGH 225 The following BLAST results are available for this feature:
BLAST of EY684278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684278 ID=EY684278; Name=EY684278; organism=Citrus sinensis; type=EST; length=910bpback to top |