EY684276

Overview
NameEY684276
Unique NameEY684276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.396e-39
Identity = 74/133 (55.64%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     H   F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY            K PV+L FSVN SG FCGVAEM   VD+N     W QDKW G F V+W  +KDVPN QLRHI LENN+ +
Sbjct:  396 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNG-------KGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENK 521

HSP 2 Score: 30.4166 bits (67), Expect = 2.396e-39
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I  +Y
Sbjct:  521 KPVTNSRDTQEVPLEKAKQVLKIIASY 547
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 2.396e-39
Identity = 74/133 (55.64%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     H   F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY            K PV+L FSVN SG FCGVAEM   VD+N     W QDKW G F V+W  +KDVPN QLRHI LENN+ +
Sbjct:  396 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNG-------KGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENK 521

HSP 2 Score: 30.4166 bits (67), Expect = 2.396e-39
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I  +Y
Sbjct:  521 KPVTNSRDTQEVPLEKAKQVLKIIASY 547
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.396e-39
Identity = 74/133 (55.64%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     H   F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY            K PV+L FSVN SG FCGVAEM   VD+N     W QDKW G F V+W  +KDVPN QLRHI LENN+ +
Sbjct:  397 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNG-------KGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENK 522

HSP 2 Score: 30.4166 bits (67), Expect = 2.396e-39
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I  +Y
Sbjct:  522 KPVTNSRDTQEVPLEKAKQVLKIIASY 548
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.526e-38
Identity = 75/133 (56.39%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     +   F+IKSYSEDDIH+SIKYS+W ST +GNK+LDAAY            K P++L FSVN SG FCGVAEM   VD+N     W QDKW G F VKW  +KDVPN QLRHI LENND +
Sbjct:  402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNG-------KGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNK 527

HSP 2 Score: 28.4906 bits (62), Expect = 1.526e-38
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I   +
Sbjct:  527 KPVTNSRDTQEVPLEKAKQVLKIIATF 553
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.526e-38
Identity = 75/133 (56.39%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     +   F+IKSYSEDDIH+SIKYS+W ST +GNK+LDAAY            K P++L FSVN SG FCGVAEM   VD+N     W QDKW G F VKW  +KDVPN QLRHI LENND +
Sbjct:  402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNG-------KGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNK 527

HSP 2 Score: 28.4906 bits (62), Expect = 1.526e-38
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I   +
Sbjct:  527 KPVTNSRDTQEVPLEKAKQVLKIIATF 553
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.526e-38
Identity = 75/133 (56.39%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   34 DQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            + YN  DF     +   F+IKSYSEDDIH+SIKYS+W ST +GNK+LDAAY            K P++L FSVN SG FCGVAEM   VD+N     W QDKW G F VKW  +KDVPN QLRHI LENND +
Sbjct:  402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNG-------KGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNK 527

HSP 2 Score: 28.4906 bits (62), Expect = 1.526e-38
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I   +
Sbjct:  527 KPVTNSRDTQEVPLEKAKQVLKIIATF 553
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.730e-38
Identity = 73/131 (55.73%), Postives = 85/131 (64.89%), Query Frame = 1 
Query:   40 YNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            YN  +F         F+IKSYSEDDIH+SIKYS+W ST +GNK+LD A+    S       K PV+L FSVN SG FCGVAEM   VD+  +   W QDKW G F VKW  +KDVPN QLRHI LENND +
Sbjct:  377 YNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSS-------KGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNK 500

HSP 2 Score: 30.4166 bits (67), Expect = 5.730e-38
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I  +Y
Sbjct:  500 KPVTNSRDTQEVPLEKAKQVLKIIASY 526
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.267e-37
Identity = 72/131 (54.96%), Postives = 86/131 (65.65%), Query Frame = 1 
Query:   40 YNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDKE 432
            YN  +F         F+IKSYSEDDIH+SIKYS+W ST +GNK+LD+A+    S       K PV+L FSVN SG FCGVAEM   VD+  +   W QDKW G F V+W  +KDVPN QLRHI LENND +
Sbjct:  377 YNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSS-------KGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNK 500

HSP 2 Score: 30.8018 bits (68), Expect = 1.267e-37
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFKNY 511
            KPVTNSR+ QEV   +  ++L I  +Y
Sbjct:  500 KPVTNSRDTQEVPLEKAKQVLKIISSY 526
[Close]
BLAST of EY684276 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.427e-22
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 1 
Query:   70 DHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDAAYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQ-QDKWNGYFPVKWHIIKDVPNPQLRHIILENND 426
            +++ FFVIKS S   + +S    +WSST  GNK+L  AY+   S     G+K  VFLFFS+N SG+FCGVAEM+  +  + +   W+ + K+   F V+W I++D+ N  L+  ++ +N+
Sbjct:  153 ENSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNS-----GAK--VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNE 265

HSP 2 Score: 34.2686 bits (77), Expect = 6.427e-22
Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  431 KPVTNSREPQEVKFPQGIEILNIFK 505
            KP+T+SR+ QE+ +  GI I+N+FK
Sbjct:  267 KPITHSRDTQEIPYSIGISIINLFK 291
The following BLAST results are available for this feature:
BLAST of EY684276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YTHD2_MACFA2.396e-3955.64YTH domain family protein 2 OS=Macaca fascicularis... [more]
YTHD2_HUMAN2.396e-3955.64YTH domain family protein 2 OS=Homo sapiens GN=YTH... [more]
YTHD2_BOVIN2.396e-3955.64YTH domain family protein 2 OS=Bos taurus GN=YTHDF... [more]
YTHD3_PONAB1.526e-3856.39YTH domain family protein 3 OS=Pongo abelii GN=YTH... [more]
YTHD3_MOUSE1.526e-3856.39YTH domain family protein 3 OS=Mus musculus GN=Yth... [more]
YTHD3_HUMAN1.526e-3856.39YTH domain family protein 3 OS=Homo sapiens GN=YTH... [more]
YTHD1_MOUSE5.730e-3855.73YTH domain family protein 1 OS=Mus musculus GN=Yth... [more]
YTHD1_HUMAN1.267e-3754.96YTH domain family protein 1 OS=Homo sapiens GN=YTH... [more]
YD374_YEAST6.427e-2239.17YTH domain-containing protein YDR374C OS=Saccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-B07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684276 ID=EY684276; Name=EY684276; organism=Citrus sinensis; type=EST; length=967bp
AACAGTGATAGTATATCTTCTCTTATTTGGAAAGATCAGTATAATCTTCC
TGACTTTCGGATCAAATATGATCATGCTCTTTTCTTTGTCATCAAATCTT
ACAGTGAGGATGACATTCACAAAAGCATTAAATACAGTGTTTGGTCTAGT
ACTCCAAATGGGAATAAGAAGCTGGATGCTGCGTATGAAGATGCACAAAG
CAGGATTGCTGAGAAAGGCAGCAAATGTCCTGTTTTTCTTTTCTTTTCGG
TGAATGCAAGTGGTCAGTTCTGTGGAGTTGCGGAGATGATAGGCCGAGTG
GATTTCAATAAGAATATGGATTTTTGGCAACAGGATAAGTGGAATGGTTA
TTTCCCTGTCAAGTGGCACATTATAAAAGATGTTCCAAACCCGCAGTTAC
GACATATAATACTTGAAAATAATGACAAAGAAACCAGTAACCAATAGCAG
AGAACCCCAGGAGGTGAAATTTCCTCAGGGTATTGAAATTTTGAACATAT
TTAAGAATTATCCTTTCCAAAAACGTCCATATTGGGAATGAATTTTGATT
TTTTATGAAAAAGCCGTCCAAAGGGTGGATGCCAAAAAAAGAAAATCGAA
AGGCAAAAAGAAACTTAACCCCCCCAGCCTTTCCCTACCAATAGGGTTAA
TCCGGCTGGAAAAAAATGGTTTAGAGGCCTGCCAAGGAAATATAGGGAAA
AGGAAATAAAGGGAAGGGCAACCGGGCTTGGACAGAATTGGATTTTAATG
GAAAAGCCCAAAGTGAAAGGCCCCGGGGAAAAAAATTATCTTTCCCCAAA
CTAATTGCGGGAAAGGGCCCGCCCCCCTCCTTGGGGACCTTTGTGAGTGG
GAAAAATAAAAGAAATTTTTGAAAAAAAATATGAAAAAAATAGGGTATAT
TTATTGAAGAGAAAAATATCCCCAAATGCTTTTTATGGGGGCAACGCTTT
TGTGGGGGGGGGGAGAC
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