EY684275

Overview
NameEY684275
Unique NameEY684275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684275 vs. ExPASy Swiss-Prot
Match: FTRV_MAIZE (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.122e-13
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:  232 KIGAKVKVKVPLKVYHVPRVPEHDLSGMESVLKQYVSVWKGKKIYTNMPYKVAF 393
            KIG +V+V  PL+VYHV + P+ D+ GME V+KQYV VWKGK++  N P+KV F
Sbjct:   17 KIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEF 70

HSP 2 Score: 24.2534 bits (51), Expect = 1.122e-13
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 2 
Query:  392 FVTEIEG--RPVKFFDHLKEKE 451
            F   +EG  +PV+FF HL+E E
Sbjct:   70 FELAVEGQPKPVRFFAHLREDE 91
[Close]
BLAST of EY684275 vs. ExPASy Swiss-Prot
Match: FTRV_SPIOL (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea GN=FTRV PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.337e-13
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 1 
Query:  124 ISCEVAVKSNNSTASVGLEXXXXXXXXXXDDGFDESKIGAKVKVKVPLKVYHVPRVPEHDLS-GMESVLKQYVSVWKGKKIYTNMPYKVAF 393
            I CEVA+KS++ST                    +  K+G KVKVK PLKVYHVP++PE +L+  M  V+KQYV  WKGK I  N P+KV +
Sbjct:   60 ICCEVALKSDSSTGFDSSSSSPPEEDEELKKNLE--KVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEY 148
The following BLAST results are available for this feature:
BLAST of EY684275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FTRV_MAIZE1.122e-1357.41Ferredoxin-thioredoxin reductase, variable chain O... [more]
FTRV_SPIOL5.337e-1346.15Ferredoxin-thioredoxin reductase, variable chain, ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-B06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684275 ID=EY684275; Name=EY684275; organism=Citrus sinensis; type=EST; length=982bp
TTTGTACCTACCGGCTACTTCTTGCGCAGATAAATCAGACGGCCACTTAC
GAATGCGTTTGTCTCAGTTTCTTCATTTTCAGCTGCCAATTGTAGTGACA
ATGTTAATGTTAACAAAAGAAGAATCTCCTGTGAAGTAGCTGTAAAATCC
AACAATTCAACGGCATCCGTAGGACTAGAGAGCAGTCCATCTTCATCAGC
ATCAGCGTCGGATGATGGCTTTGATGAGTCTAAGATTGGTGCGAAGGTTA
AGGTGAAGGTGCCGTTGAAGGTTTACCATGTTCCTAGGGTTCCGGAGCAT
GATCTGTCTGGCATGGAAAGTGTGCTCAAGCAATACGTCAGCGTTTGGAA
AGGAAAGAAAATCTACACCAATATGCCTTACAAGGTAGCGTTTTGTTACT
GAAATTGAAGGCCGTCCTGTCAAGTTCTTTGACCATCTCAAGGAAAAAGA
AATTTGAATTACCTTAGATTAATAATTTTAAATTTTTTAATAATTTTAGA
ACATGGTAATTACTTTCACTTTTCCCGGTCTACCATCCTACAAAAAAATA
AATATTTTTTTAAGACTTATGAAAGAAAAACTCCTATCCGAGGAAAATTA
AAGGCTTTCTATAGTGGTTTATTATTTGGTTTATACTTTTTCTCCTTGGA
GAATAAAAAACCCATTCATTTTTTCATAATTAATAAATAAAAAAATAAAG
AGGGGCGGGCCCTGCATTTAAAAAGGAAATCCTAAAGATATTAAAGTATA
AACACGGGGGCATGGACCAAGAAGCAAATGAACACTCATTTACATTAAGG
GGGGGTAAACCCCCTAAATATTTTGAAAAATTTGCAGTGGAGGGGCCCGT
CTAAGGATTTTTAAATAACTGGATCACGGGCGAGGGACTGTGAAAAAGAA
AAAACGACCCAGGGGAGCAAGTATTATAAACCACCCAAAACTATTATAAA
TATTACGCTAAACCCTTAATGTCGGAGCGAGA
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