EY684265

Overview
NameEY684265
Unique NameEY684265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.654e-82
Identity = 146/181 (80.66%), Postives = 156/181 (86.19%), Query Frame = 1
Query:    1 VSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEEE 543
            +SYG GT NTALVYHHGKLLALSEADKPYA+KV EDGDLQTLGMLDYDKRL HSFTAHPKVDP+TGEMF+FGYAHTPPYITYRVISKDG+MHDPVPIT+SDPIMMHDFAITENYA+FMDLPL FRPKEMVK   LIF+FD TKKARFG+LPRYAK    +           FH ANAWEEE
Sbjct:  167 LSYGGGTTNTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFSFGYAHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKD-EQHIRWFELPNCFIFHNANAWEEE 346          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.115e-80
Identity = 143/181 (79.01%), Postives = 155/181 (85.64%), Query Frame = 1
Query:    1 VSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEEE 543
            VSYG+GTANTALVYHH KLLALSE DKPYA+KV EDGDLQTLGMLDYDKRL H+FTAHPKVDP+TGEMFTFGY+HT PY+TYRVISKDGFM DPVPIT+SDP+MMHDFAITENY+IFMDLPLYFRPKEMVK   LIF+FD TKKARFG+LPRYAK    +           FH ANAWEEE
Sbjct:  165 VSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTAPYVTYRVISKDGFMQDPVPITISDPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKD-DKHIRWFELPNCFIFHNANAWEEE 344          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 3.244e-80
Identity = 142/186 (76.34%), Postives = 157/186 (84.41%), Query Frame = 1
Query:    4 SYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIW------LFFHMANAWEEE 543
            +YGNGTANTALVYHHGKLLAL EADKPY +KVLEDGDLQTLG++DYDKRL HSFTAHPKVDP TGEMFTFGY+HTPPY+TYRVISKDG MHDPVPIT+S+PIMMHDFAITE YAIFMDLP++FRPKEMVKE K+I++FD TKKARFG+LPRYAK           + W        FH ANAWEEE
Sbjct:  166 TYGNGTANTALVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVISKDGIMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAK-------DELMIRWFELPNCFIFHNANAWEEE 344          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.834e-78
Identity = 141/180 (78.33%), Postives = 151/180 (83.89%), Query Frame = 1
Query:    1 VSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEE 540
            VSYG GT NTAL+YHHGKLLALSEADKPY VKVLEDGDLQTLG+LDYDKRL HSFTAHPKVDP+T EMFTFGYAHTPPY+TYRVISKDG M DPVPIT+   +MMHDFAITENY+IFMDLPLYF+PKEMVK  KLIF+FD TKKARFG+LPRYAK   S            FH ANAWEE
Sbjct:  169 VSYGVGTGNTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPYVTYRVISKDGVMRDPVPITIPASVMMHDFAITENYSIFMDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKD-DSLIRWFELPNCFIFHNANAWEE 347          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.422e-35
Identity = 78/180 (43.33%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 SYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEE 540
            ++G G AN  LVY +G+LLA+SE D PY V++  +GDL+T+G  D+D +L+ +  AHPKVDP +GE+F   Y   + PY+ Y   S DG     V I +  P MMHDFAITEN+ +  D  + F+  EM++    +  +D  K ARFGIL +YA+   SN   +       FH+ NAWEE
Sbjct:  241 AHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRGGSPV-VYDKNKVARFGILDKYAED-SSNIKWIDAPDCFCFHLWNAWEE 418          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.519e-32
Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 1
Query:   10 GNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEE 540
            G G AN  LVY +G LLA+SE D PY VKV + GDL+T G  D+D +L+ +  AHPK+DP T E+F   Y   + PY+ Y   + DG     V I +  P M+HDFAITEN+ +  D  + FR  EM++    +  +D+ KK+RFGIL + AK   S+   +       FH+ N+WEE
Sbjct:  303 GLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRGGSPV-VYDEKKKSRFGILNKNAKD-ASSIQWIEVPDCFCFHLWNSWEE 478          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.519e-32
Identity = 77/183 (42.08%), Postives = 104/183 (56.83%), Query Frame = 1
Query:   10 GNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWL------FFHMANAWE 537
            G G AN  LVY H +LLA+SE D PY V+V ++GDL+T+G  D+D +L  +  AHPK+DP T E+F   Y     PY+ Y   S +G     V I ++ P MMHDFAITEN+ +  D  + F+  +M    K    +D  K +RFGILPR AK         S ++W+       FH+ NAWE
Sbjct:  233 GTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFAITENFVVIPDQQVVFKLSDMFL-GKSPVKYDGEKISRFGILPRNAK-------DASEMVWVESPETFCFHLWNAWE 407          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.519e-32
Identity = 76/181 (41.99%), Postives = 105/181 (58.01%), Query Frame = 1
Query:    4 SYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEEE 543
            S G G AN  LVY +G+LLA+SE D PY V+V +DGDL+T+G  D+D +L  +  AHPK+DP TGE+    Y     PY+ Y     DG   D V I +  P M+HDFAITEN  +  D  + F+ +EM++    +   D  K +RFG+LP++A    S    +       FH+ NAWE+E
Sbjct:  242 SAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRGGSPV-VLDKEKTSRFGVLPKHAAD-ASEMAWVDVPDCFCFHLWNAWEDE 420          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.805e-30
Identity = 79/182 (43.41%), Postives = 108/182 (59.34%), Query Frame = 1
Query:   10 GNGTANTALVYHHGKLLALSEADKPYAVKVL-EDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDP-VPI-TVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLIWLFFHMANAWEEEG 546
            G G ANT+L + +G+L AL E D PY V++  EDGD+ T+G ++ +   + S TAHPK DP TGE F+F Y    PY+TY     DG    P VPI +  +P  +HDFAITE+YA+F D+ +  +P E+V+  ++I   D  K  R G+LPRYA    S         +   H+ NAWEEEG
Sbjct:    8 GIGLANTSLQFSNGRLHALCEYDLPYVVRLSPEDGDISTVGRIENNVSTK-STTAHPKTDPVTGETFSFSYGPIQPYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEHYAVFPDIQIVMKPAEIVRGRRMIGP-DLEKVPRLGLLPRYATS-DSEMRWFDVPGFNMVHVVNAWEEEG 186          
BLAST of EY684265 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.079e-30
Identity = 73/183 (39.89%), Postives = 104/183 (56.83%), Query Frame = 1
Query:   10 GNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPI-TVSDPIMMHDFAITENYAIFMDLPLYFRPK--EMVKENKLIFTFDDTKKARFGILPRYAKK*GSNENGLSFLI--WLFFHMANAWEEE 543
            G G ANT+L +   +L AL E+D PYAV++ E GD++T+G  D+D +L  S TAHPK DP TGE F F Y   PP++TY      G     VPI +++ P  +HDFAIT+ +AIF ++ L  R    ++V E       D+ K  R G++P+YA   G       F +  +   H  NAW+E+
Sbjct:  233 GIGLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYA---GDESEMKWFEVPGFNIIHAINAWDED 412          
The following BLAST results are available for this feature:
BLAST of EY684265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CCD1_PHAVU2.654e-8280.66Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD1_PEA1.115e-8079.01Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD1_ARATH3.244e-8076.34Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=... [more]
CCD_CROSA8.834e-7878.33Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Cr... [more]
NCED3_ARATH5.422e-3543.339-cis-epoxycarotenoid dioxygenase NCED3, chloropla... [more]
NCED9_ARATH2.519e-3242.709-cis-epoxycarotenoid dioxygenase NCED9, chloropla... [more]
NCED5_ARATH2.519e-3242.08Probable 9-cis-epoxycarotenoid dioxygenase NCED5, ... [more]
NCED1_MAIZE2.519e-3241.999-cis-epoxycarotenoid dioxygenase 1, chloroplastic... [more]
ZCD_CROSA1.805e-3043.41Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromo... [more]
CCD4_ARATH3.079e-3039.89Probable carotenoid cleavage dioxygenase 4, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-051-A07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684265 ID=EY684265; Name=EY684265; organism=Citrus sinensis; type=EST; length=873bp
GTTTCATATGGAAATGGGACAGCTAATACAGCTCTTGTATATCACCATGG
GAAACTTCTAGCGCTCTCAGAGGCGGACAAACCATATGCCGTCAAAGTTC
TGGAAGATGGAGATCTGCAAACACTTGGTATGCTTGACTATGACAAGAGA
TTACAACATTCCTTTACTGCCCATCCAAAGGTTGATCCATACACTGGCGA
GATGTTTACCTTTGGCTATGCACACACACCACCATATATCACATACAGAG
TTATTTCAAAGGATGGTTTCATGCATGATCCTGTACCAATAACCGTATCA
GACCCCATCATGATGCACGACTTTGCTATTACTGAGAATTATGCTATTTT
CATGGATCTTCCGCTGTATTTCAGACCAAAGGAAATGGTGAAAGAAAACA
AGCTGATATTCACATTTGATGATACAAAGAAAGCTCGTTTTGGTATACTT
CCCCGATATGCAAAGAAATGAGGCTCAAATGAAAATGGTTTGAGCTTCCT
AATTTGGCTTTTCTTCCATATGGCCAATGCTTGGGAGGAGGAAGGAATAA
AGTGTTTCTGATCCTTTGCCGCCTAAACAAGCCAGGATCTAAACATGGGC
CATTGGGGCTGGTCAAAAAAAACCTAAAAAAAATTTCCCAAAAAGGAATT
GGATGAAAAAGAAAATCCACTCGGAAAACGGGCCTAACTTCCACAAAAAA
AAAATAACCGGCCTTCCCCCTGTTTGATTTTCCTAAGGGGGAAGGGAGGG
CACACACGGGGGGGGAAGCAAAAAAATTTGTGAGTGGGAAAAAAAATCTA
AAAAATCAATTTTGAAAAAATCACAAGGGGGATTATACAATATTTTATTT
TGGCATTGGGTAAACCAAAAAAA
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