EY684252

Overview
NameEY684252
Unique NameEY684252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684252 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.294e-14
Identity = 45/77 (58.44%), Postives = 50/77 (64.94%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLYWPCVILVGCLSLARVLRKTFXXXXXXXXXXXXQKEVISE 232
            FIVPELGPDVKFSYASHKAV EYKEAK LGV+TVPVL  P   L+     A+ + KTF             KEVI+E
Sbjct:  118 FIVPELGPDVKFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLI-LSKPAKGVEKTFPLLSLLDKILPIYKEVIAE 193
[Close]
BLAST of EY684252 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.435e-13
Identity = 42/77 (54.55%), Postives = 48/77 (62.34%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLYWPCVILVGCLSLARVLRKTFXXXXXXXXXXXXQKEVISE 232
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL  P   L+     A+ + KTF             KEVI E
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKELGVDTVPVLVGPVTFLL-LSKPAKGVEKTFPLLSLLDKILPVYKEVIGE 194
[Close]
BLAST of EY684252 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.581e-12
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLYWPCVILVGCLSLARVLRKTFXXXXXXXXXXXXQKEVISE 232
            FIVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL  P   L+     A+ + K+F             KEV++E
Sbjct:  119 FIVPELGPEVNFSYASHKAVLEYKEAKALGVDTVPVLVGPVSYLL-LSKQAKGVDKSFDLLSLLPKILPIYKEVVAE 194
[Close]
BLAST of EY684252 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.581e-12
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 2 
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLYWPCVILVGCLSLARVLRKTFXXXXXXXXXXXXQKEVISE 232
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL  P   L+     A+ + K+F             KEVI+E
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLL-LSKAAKGVDKSFELLSLLPKILPIYKEVITE 194
The following BLAST results are available for this feature:
BLAST of EY684252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
METE_SOLSC1.294e-1458.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO5.435e-1354.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR1.581e-1253.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH1.581e-1253.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-H05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684252 ID=EY684252; Name=EY684252; organism=Citrus sinensis; type=EST; length=620bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTTATTGGCCCTGTGTCATACTTGTTGGCTGTCTAAGCCT
GGCAAGGGTGTTGCGAAAAACCTTTTCTCTTCTTTCTCTTCCTCCGAAAA
TCCTTCCAATCCAAAAGGAAGTTATTTCCGAACCTTAAGGGTGCTGGTGG
TTCCTGGATTCATTTGGATGAGCCATTGCTTGGTTATGGAATCTTGGACT
CACAAAAAATTGGTTGCCTTTCCGGGAGGGCTTTATGCCCGACATAAAAT
CCAAACTCGGTCTGGGTTGGAATGGTTCTTGGTTGAAAAACCTTACTTTT
TGGCGGGAAGTTCCCCGCCTTAAAAGACTTTCCAAAACCCCCCCTTTCTT
TTTAAGAGGGGGGGCACCCCCCCTTTATGGGATTTTTTATATTTTGGGGT
TCTGGGGGAAAAAAGAAAAGAAACCCCTTGGGAAATTTGTGTTAAAACAG
AAGAGGGGGGATTTCCCCCCTGGCGCGGGGGGCCAAAATAATACCCCCCT
CCTTCTTTGCCGCGTGGGGG
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