EY684249

Overview
NameEY684249
Unique NameEY684249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684249 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.645e-25
Identity = 65/124 (52.42%), Postives = 79/124 (63.71%), Query Frame = 2 
Query:  125 MKPVASED-FAILKTAED*VKLWGSDLTVTELGGGAWSWGDTSYCNNFPWYDWSITAANAAFDTRRDNGITFFDTADVYGSGASFCALNSYTLLGRFRKEMKQRDPEVEVTVCFQLCSFAMEAG 493
            ++ VAS D  A   + E  VKL GSDL VT+LG G WSWGD SY N+F W D  + AA  AFDT  DNGI FFDTA+VYGS  S  A++S TLLGRF +E K+R P  EV+V  +  +     G
Sbjct:   30 VRAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALPWRFG 153
The following BLAST results are available for this feature:
BLAST of EY684249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1669_ARATH1.645e-2552.42Uncharacterized oxidoreductase At1g06690, chloropl... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-G11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684249 ID=EY684249; Name=EY684249; organism=Citrus sinensis; type=EST; length=1000bp
CACTATATTTTATCTTGCACCTTTTCAGACATATACGAACCCTTTACTGG
GTTACTGTCTCAAAATGGCCATGCATGTGAGCGGTGCGTGCATTTCTGTG
TTCAGTGGGAGCAGAGTTGGCAACATGAAACCCGTTGCTTCTGAGGATTT
TGCTATACTGAAAACAGCCGAAGACTAAGTGAAATTATGGGGGTCTGATT
TGACCGTGACGGAGCTTGGCGGTGGGGCTTGGTCGTGGGGTGACACTAGC
TACTGCAATAACTTCCCATGGTATGACTGGAGCATCACCGCTGCTAACGC
TGCTTTTGATACCAGGCGGGATAATGGAATCACTTTTTTCGACACTGCTG
ATGTATATGGTTCTGGGGCCTCATTCTGTGCCTTAAATTCCTACACACTA
TTGGGAAGATTTAGAAAGGAAATGAAACAAAGGGATCCGGAAGTGGAGGT
TACTGTTTGCTTCCAACTTTGCAGCTTTGCCATGGAGGCTGGGCCGCCTG
ATTGTCCTCACTGCTCATAAGGAATTCACTTCTTCCGGTTTGGCCCTTTC
CTCTGTTGAAATTTATCGGCTGCACTGGGGCTGGATTTTGGGGGAAAAAG
AAAGGGTTAATTTCTGGTCCTGGAGAATGCCGATGGAACCGGGGCCTTGG
GAAAGGGCTGGGGGGGAGTTAAACAATTTACTTTGAGGAAAAAACTTCCG
GCTTGTTTCCAAAAATTTTTTAAAAAACATAGAAAATTCATTTAACTCTT
TTACCAAGGGGGATCTTTTCCCTTTTACTACAAACAACCAAAAAAAAAAA
AGGGGGGGGGGGGGCCCCCCCTTGTGTGGAGAATTTCGGGGCCCCCCCTT
TAGTTAGAACCTATGCTGTCTCCAAAATGGCACAAACGGGGGTCTCCTTT
CGGGGAAAAAAGGTAGAAAACACCCTAGGGAAAATACCCCCCTCAGGTGT
GGGGGCCCCCACAGGAGAAGGAGGGGTTTTTTCTTTCATCTTGACGCCGA
back to top