EY684244

Overview
NameEY684244
Unique NameEY684244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1052
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684244 vs. ExPASy Swiss-Prot
Match: Y5010_ARATH (Uncharacterized protein At5g50100, mitochondrial OS=Arabidopsis thaliana GN=At5g50100 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.686e-39
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 2 
Query:    8 MAVRGPLWIACTT---RGRNPFVSSANHYFFMRFHHSPSRSFQRFTSHPDHRSGYRNQIRAIQGATADPLTSKKEYDKDPSPENWKIKMLYDGDCPLCMREVNMLKERNKQYGTIKFVDISSDEYSIEE 385
            MA RG +  A +T     RNP + S + +F   F+H    +            G++ Q+RAIQG + DP+ +  +  ++P P+NWKIKMLYDGDCPLCMREVNML ERN+++GTIKFVDISS++YS E+
Sbjct:    1 MATRGAVAAAASTIWKHRRNPSLRSLSRHFNPNFNHRIIPT------------GFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKMLYDGDCPLCMREVNMLMERNEKHGTIKFVDISSNDYSPED 117

HSP 2 Score: 61.2326 bits (147), Expect = 8.686e-39
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1 
Query:  406 KTVMGSIHAIVSDGTVVTDVKAFKKLYEKVGLGWVYAI 519
            KTVMG IHAI SDG VV  V+AF++LYE+VGLGWVY I
Sbjct:  124 KTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLGWVYTI 161

HSP 3 Score: 21.557 bits (44), Expect = 8.686e-39
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3 
Query:  387 NQGLDYKNCYGK 422
            NQGLDYK   G+
Sbjct:  118 NQGLDYKTVMGQ 129
The following BLAST results are available for this feature:
BLAST of EY684244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5010_ARATH8.686e-3948.06Uncharacterized protein At5g50100, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-G05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684244 ID=EY684244; Name=EY684244; organism=Citrus sinensis; type=EST; length=1052bp
AGCAGAAATGGCTGTAAGAGGCCCTTTATGGATTGCATGCACCACAAGAG
GAAGAAACCCGTTTGTCTCATCAGCAAATCATTATTTTTTTATGAGGTTT
CATCACTCTCCTTCACGTTCGTTCCAAAGATTCACATCACATCCCGACCA
CCGTTCTGGATATAGAAATCAAATTCGTGCAATCCAGGGGGCCACTGCGG
ACCCCTTAACTTCCAAGAAAGAATATGATAAGGATCCATCACCAGAGAAC
TGGAAGATTAAAATGCTTTATGATGGAGATTGCCCTCTCTGCATGCGAGA
GGTTAACATGCTAAAGGAGAGGAATAAGCAATATGGGACTATAAAGTTTG
TTGATATAAGTTCAGATGAGTACTCTATTGAGGAGAAATCAAGGCCTAGA
CTACAAAAACTGTTATGGGAAGTATTCATGCAATCGTTTCGGATGGCACT
GTAGTCACTGACGTCAAAGCATTTAAAAAATTGTACGAAAAAGTTGGCCT
TGGATGGGTCTATGCAATTTACTAAAATATGAACCTGTAAGTCTTCATAT
CCCATTGGTGTTGGTATGGTTATTTCAAAAACTTGGGGTTTACCAAAAAA
AAATTGTTGGTAATCCCGGCCTGGTTCCTTTTTTTTTTTCAAATTTTTTT
TTTTTTTAAAGGGGGAAGCAAGGGTAATTTGCAAATTGCACAAAATAACT
TGAATTTTGTTTAAAAGGGGTTGGGGCGAAATTTCGCGTCTTCAAATACA
AAGGTGAAATTCTTGGTATTTATAAGGAAATTTTTCCCAATTAAAAGTTT
TTCGGAGATTGGTTTTTAAAGTTTCTTTGGGCGTTGCCCGCGGGCAAAAA
TAAAAGCGCCTTATAGGAGGGCAAAGACACTTTGGGTTTTTCGCGACCGA
AAACAGAGGAAGGTATTTTTTTTGGGAAAAACCCTTTTTTTGGGGGAAAA
AAATATTTTATAAGCACAAAAACAATACCACCCCGAGTTTTTTTATAATA
CACTAAAATTATTGAAGCACCTTCTTAAAAAAAGAGAAGAAGGAGGGGGA
GA
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