EY684242

Overview
NameEY684242
Unique NameEY684242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684242 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.050e-11
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:  163 EKXXEDFSMNVQEQENVKRVQLGDKYLSEAALGEANEDAIQSGNFYG 303
            EK  E  +M VQEQENVKRVQL DKYLSEAALG+AN DA+ +G FYG
Sbjct:  391 EKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
The following BLAST results are available for this feature:
BLAST of EY684242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RCA_MALDO9.050e-1172.34Ribulose bisphosphate carboxylase/oxygenase activa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-G03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684242 ID=EY684242; Name=EY684242; organism=Citrus sinensis; type=EST; length=1028bp
CGGGAGGGTAGGGTTCGGGATTCCGGGGTCGACCACCCGTTTGGTCTATG
ATGATGAGGTGTTTCTTTTAAAGGGGGGNGNTGGTGNNGGAAGNANNGGN
AAGCTCTTTAAGAGGGCGNNGNGANGNGNNNNNNNNNNNNNNGNNNNNNN
GGNNGANNNNGGGAGAAGNGGGNNGAGGATTTCTCTATGAATGTGCAAGA
GCAAGAGAATGTGAAGAGAGTTCAGTTGGGTGACAAGTATTTGAGTGAGG
CCGCTCTTGGTGAAGCTAATGAAGATGCTATTCAGAGTGGAAATTTCTAT
GGTTAGCCCCCTTGATCCTAGCTAAGAGGCCTTGATGGGAGGTTTGCTAC
TAGCATTCTACCAAATTTAAAGCATAAATTGAGATCAAATGAAGAATAAC
AAAGCATTTTTTTTTTTGTGGGTAAATTTTGCTGTTGCAGGCAAAGCAGC
TTTGGGGATGAGTGTTCCAGTTCCTGAAGGATGTACTGATGCTACTGGAA
GAAAACTTTGATCCATCTGGAAAAAGTGATGATGGAAGCTGCCAATAAAC
GCTTTAGGCCTTTGTTTTTAGGGGTTGAAAAAGGGACGCATTTTGATTAG
GGAGTGAAATAATTTGATAATTATTGTTGCATTTTCTTTTCTTTTTTAAT
AGAAAAAAATCTTATAATTTTGGGGTTAATTTGGAAAATCTTTTTTTTAA
TTTTTTATAGTAATAAAGATAAAAAAAAAAAAAAAAAAATAGAAATTAAA
TAAATAGAAATATAAAAAATAAAGAGATAAATAATAATGGGGGGGGGGGT
CTTTATGGTAATACCTACTTTATATAACAGGCGGTGGGGGGGGATAATAA
AATTCTTTTTTGGGTGCTTGCTTTAATTATAAATTAATAGGGGGGGAGGT
ATTTTAGAGTAGGGAGAGGGGGGGAGGAAAAAGAGTGGGGATTAATAAAC
GTATTTGAAAACCATATATATAATATTACATCATCTTATTTATTTGAGAA
GGGAGGGAGGAAAAATAAAGAAAAAAAA
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