EY684241

Overview
NameEY684241
Unique NameEY684241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length978
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684241 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.916e-16
Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:  415 GMPTSRYIYADELIDVLKKKHASWELTKLGILILEACESGRYFEG 549
            GMPTSRYIYADELIDVLKKKHAS     L +  LEACESG  FEG
Sbjct:  185 GMPTSRYIYADELIDVLKKKHASGNYKSL-VFYLEACESGSIFEG 228

HSP 2 Score: 40.4318 bits (93), Expect = 2.916e-16
Identity = 20/33 (60.61%), Postives = 23/33 (69.70%), Query Frame = 3 
Query:  558 LEGLIFYATTASKG*KKPIGGTICPGKIPGPSP 656
            LEGL  YATTAS   ++   GT CPG+IPGP P
Sbjct:  231 LEGLNIYATTASNA-EESSWGTYCPGEIPGPPP 262
[Close]
BLAST of EY684241 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 4.895e-11
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1 
Query:  415 GMPTSRYIYADELIDVLKKKHASWELTKLGILILEACESGRYFEG 549
            GMPTS Y+YA++L DVLKKKHA      L +  LEACESG  FEG
Sbjct:  184 GMPTSPYLYANDLNDVLKKKHALGTYKSL-VFYLEACESGSIFEG 227

HSP 2 Score: 34.6538 bits (78), Expect = 4.895e-11
Identity = 21/54 (38.89%), Postives = 26/54 (48.15%), Query Frame = 3 
Query:  561 EGLIFYATTASKG*KKPIGGTICPGKIPGPSPWIIQTXXXXXXXXXXWMEEQGI 722
            EGL  YATTAS   ++   GT CPG+ P P P               WME+ G+
Sbjct:  231 EGLNIYATTASNA-EESSWGTYCPGEEPSPPP--EYETCLGDLYSVAWMEDSGM 281
The following BLAST results are available for this feature:
BLAST of EY684241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
VPE_CITSI2.916e-1675.56Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH4.895e-1162.22Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684241 ID=EY684241; Name=EY684241; organism=Citrus sinensis; type=EST; length=978bp
CCGCCGGGTTCCGGGGTCCGGGATTTNCGGGGTCGACCCACGCCTTCCGC
ATTTATCAAATAGGGTGTCCCCCTTTTTAACGTCNGATGCCACATCACTT
GCGGTGCAAGCTATCTATATAAACAAATTCTTCTATTATTATTATTATTA
TTATTTATTTATTTTCATATTTGTGATTTTACTGGGAATAAAAATTTGAT
TGTGTTGTTATGCTGTTGCATGTTGTTTGAAGCCTAGGCCAACATGACTC
ATGTAAAAATTGGTTACTCAGAAGGTTAAAAGTGTATTGGTTTTACTTGA
AATATCCTACCTTATTTTTTCAACAGAGTGGATATATATGTTATAACCGA
CACTATTTTTAAACTTCTGTTGTAAAATTGACTTCTTAGTTCACCTGTTT
TGTGATCTATTTTAGGGATGCCCACCAGTCGATACATATATGCTGATGAA
CTGATCGATGTCTTAAAAAAGAAGCATGCTTCCTGGGAACTAACAAAGCT
TGGTATTTTAATTCTCGAAGCCTGTGAATCTGGAAGATACTTTGAAGGGT
CTTCTTCCTGGAGGGCTTAATATTCTATGCCACCACAGCTTCAAAAGGCT
GAAAAAAACCAATTGGGGGAACTATTTGTCCGGGAAAAATTCCTGGGCCC
TCCCCCTGGATAATACAAACTGGTTTGGGTGGACTTGTTTAATTATTGCT
TTGGATGGAGGAACAGGGTATAATAACCTTTTTTGATTTTTTTTTTTTTT
CCCTTTGGCCCCATTTTTTCTTGTTTTTCCTAAACGAAACACCATGGATC
CTAGGGCTGGGCCTTCCTGTAACCCCCTGGAAAAATGAAAAAAAAAATGA
CCGGGGTTAGAACCGAGATTTTTTTTAAATTTCTGGGAAGAAAAAACTTT
TTTAACAAATTTTATTTCCTTTTTTGTGTCCGATTTTTTTTTTCCTTAAA
AAAAATCACTGGGGTCGAGAGGATGGTT
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