EY684212

Overview
NameEY684212
Unique NameEY684212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684212 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.605e-21
Identity = 48/102 (47.06%), Postives = 70/102 (68.63%), Query Frame = 1 
Query:   91 LLAFTILLNNVHPVLSGVAVGSGWKSIVEYLNLRCYYLIGVPLGILLGWVFHQGVMGIWAGMIFGGAAVQTLILAIITMRCDWDKKAEKATTALKNIK*ENR 396
            LLA +I LN + P+LSGVA+GSGW+++V Y+NL  YY+IG+P+G +LG+    GV GIW GMI  G  +QTL L ++T++ +W  + E A   +K    EN+
Sbjct:  400 LLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMI-AGVILQTLTLIVLTLKTNWTSEVENAAQRVKTSATENQ 500
The following BLAST results are available for this feature:
BLAST of EY684212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TT12_ARATH5.605e-2147.06Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-D07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684212 ID=EY684212; Name=EY684212; organism=Citrus sinensis; type=EST; length=1022bp
GGCACTGCAGTACGGTCCGGATTCCCGGGTCGACCCCCCGTCCGCTCTTC
TAGCGAATCTATCTCCCATATAATAAGCAAAATGTCTATCCTCTTAGCGT
TCACCATCCTGCTCAACAATGTTCATCCAGTTCTCTCGGGGGTGGCTGTG
GGATCGGGATGGAAATCGATTGTGGAATACCTAAACTTAAGGTGCTACTA
TTTGATTGGAGTTCCCCTTGGAATTCTATTGGGCTGGGTCTTCCATCAAG
GTGTCATGGGAATTTGGGCTGGAATGATATTTGGCGGCGCTGCAGTCCAA
ACCTTGATACTAGCCATCATTACCATGCGGTGCGACTGGGATAAAAAGGC
GGAGAAAGCAACCACGGCTTTAAAGAACATAAAATAAGAGAATCGATCCG
GGCCAGGTTGGTTGGTAATGCTAGTAAACCTTTTTTTTTGGGGTCCTTTA
TAGAGAATCAAGAAATGTTATAATTTTCCAAACCATTAATATTTGCTGAG
CTTTGGGTGAAAAAGTTTCGATATTTTAAGGAACCAATTTCTGGGTTATT
GTATTGTGGGTGATATTTATCCGGCCTATCTTTGAACTTTGGAAAAAGTG
TGTAATGAAATAAATTTTTTAAATTTTGCTATAACAATCACTGTATACAA
TGTAACGCCCACCCATACATTTATATTTTTTGACCTGGTAATTGTAATTT
TTTTATTTTGAAAGGGTGTATTTGTAATAATTTGTACACAAAAAAAAAAA
AAAAAAAAAAAAAAAGGGGGGCACGTTCTTAGAGAATCTAAGATTAAAAA
CCGGTGGGGGGGGGACCTTCCAGGGTCTTTCCAATGGTGGGCCCCCATCA
ATTTGCCATTCCCATGGCCCTGGGTTTTTACAAAAGACTGAGAAGGGGAA
AAAAACCAAGGCGCTATACCCCCACTTTAAGAGCCCCCATTTAAAAAGCG
GACTACCCCCTTTTCGCGACCTTCTGGGGGGAAAAATAAAGGAAAAAAAA
AAAGCACCCGAGGCCCCACCTA
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