EY684209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.404e-49 Identity = 95/166 (57.23%), Postives = 115/166 (69.28%), Query Frame = 2 Query: 2 FVTDYKPLKFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK 499 F + K + FIIKSYSED++H+SIKY +W ST +GNK+LD A+ K PV+L FSVN S FCGVAEM PVD+ S W QDKW G+F +KW +KDVPN+Q RHI LENNDNKPVTNSRDTQEV LE+ ++L I +Y SI DDF YE RQ+ Sbjct: 382 FDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 544
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.206e-48 Identity = 94/166 (56.63%), Postives = 116/166 (69.88%), Query Frame = 2 Query: 2 FVTDYKPLKFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK 499 F + K + FIIKSYSED++H+SIKY +W ST +GNK+LD+A+ K PV+L FSVN S FCGVAEM PVD+ S W QDKW G+F ++W +KDVPN+Q RHI LENNDNKPVTNSRDTQEV LE+ ++L I +Y SI DDF YE RQ+ Sbjct: 382 FEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQE 544
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.881e-48 Identity = 94/170 (55.29%), Postives = 117/170 (68.82%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK----AMQEKEGK 523 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K PV+L FSVN S FCGVAEM VD+ W QDKW G+F ++W +KDVPNSQ RHI LENN+NKPVTNSRDTQEV LE+ ++L I +Y SI DDF YE RQ+ +E++G+ Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQGR 577
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.881e-48 Identity = 94/170 (55.29%), Postives = 117/170 (68.82%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK----AMQEKEGK 523 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K PV+L FSVN S FCGVAEM VD+ W QDKW G+F ++W +KDVPNSQ RHI LENN+NKPVTNSRDTQEV LE+ ++L I +Y SI DDF YE RQ+ +E++G+ Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQGR 577
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.881e-48 Identity = 94/170 (55.29%), Postives = 117/170 (68.82%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK----AMQEKEGK 523 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K PV+L FSVN S FCGVAEM VD+ W QDKW G+F ++W +KDVPNSQ RHI LENN+NKPVTNSRDTQEV LE+ ++L I +Y SI DDF YE RQ+ +E++G+ Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKERQGR 578
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.161e-47 Identity = 91/158 (57.59%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK 499 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K P++L FSVN S FCGVAEM VD+ W QDKW G+F +KW +KDVPN+Q RHI LENNDNKPVTNSRDTQEV LE+ ++L I + SI DDF YE RQ+ Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 4.161e-47 Identity = 91/158 (57.59%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK 499 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K P++L FSVN S FCGVAEM VD+ W QDKW G+F +KW +KDVPN+Q RHI LENNDNKPVTNSRDTQEV LE+ ++L I + SI DDF YE RQ+ Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.161e-47 Identity = 91/158 (57.59%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDMSILDDFDFYEDRQK 499 + FIIKSYSED++H+SIKY +W ST +GNK+LDAAY K P++L FSVN S FCGVAEM VD+ W QDKW G+F +KW +KDVPN+Q RHI LENNDNKPVTNSRDTQEV LE+ ++L I + SI DDF YE RQ+ Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 8.158e-27 Identity = 60/151 (39.74%), Postives = 94/151 (62.25%), Query Frame = 2 Query: 26 KFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQD-KWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFKNYVTDM-SILDD 472 +FF+IKS S +V +S G+W+ST GNK+L AY K+ VFLFFS+N S +FCGVAEM + + W+ + K+ F ++W I++D+ N + ++ +N+ KP+T+SRDTQE+ GI ++N+FK +D+ S LD+ Sbjct: 156 RFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAY---KKLNSGAKVFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSFLDE 303
BLAST of EY684209 vs. ExPASy Swiss-Prot
Match: YTDC2_MOUSE (Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.643e-14 Identity = 46/140 (32.86%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 20 PLKFFIIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYCEAKEKQDPCPVFLFFSVNASAQFCGVAEMFGPVDFEKSVDYWQQDKWSGQFPLKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQGIEMLNIFK 439 P+++FI+KS + N+ S + G+W++TP+ +KL+ A+ E+ V+L FSV S F G + M + EKS D W G F ++W + +P H++ NDNK V SRD QE++ + G ++L +++ Sbjct: 1302 PIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESS------MVYLVFSVQGSGHFQGFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWE 1434 The following BLAST results are available for this feature:
BLAST of EY684209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684209 ID=EY684209; Name=EY684209; organism=Citrus sinensis; type=EST; length=959bpback to top |