EY684207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUB1_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Brassica napus PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.591e-61 Identity = 95/119 (79.83%), Postives = 104/119 (87.39%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTD 369 E IAKL+ VAVIKVGAAT+T LEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+KLEDAD+RLGADIVQKALVAPA+LI+ NAG+E EVVVE + SEW GY AMTD Sbjct: 371 ERIAKLAGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTD 489 HSP 2 Score: 70.0922 bits (170), Expect = 1.591e-61 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 YEN+L+AG+IDPAKVTR ALQNAASVA MVLTTQAIV KPK Sbjct: 491 YENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 532 HSP 3 Score: 26.5646 bits (57), Expect = 1.591e-61 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 498 RPKIPETAPPQGLM 539 +PK P APPQGLM Sbjct: 532 KPKAPTAAPPQGLM 545
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.970e-61 Identity = 97/119 (81.51%), Postives = 106/119 (89.08%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTD 369 E IAKLS VAVIKVGAAT+T LEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS +VPAIK+KLEDAD+RLGADIVQKALVAPA+LI+ NAG+E EVVVE +K+ EW GY AMTD Sbjct: 412 ERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGEWEVGYNAMTD 530 HSP 2 Score: 68.5514 bits (166), Expect = 2.970e-61 Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 YEN++++G+IDPAKVTR ALQNAASVA MVLTTQAIV +KPK Sbjct: 532 YENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 573
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.524e-59 Identity = 92/120 (76.67%), Postives = 105/120 (87.50%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372 E IAKLS VAVIKVGA T+T LEDR+LRIEDAKNATFAAIEEGIVPGGGAA VHLS +VPAIK+ +ED D+RLGADI+QKAL APASLI++NAGVE EVV+E +K+SEW GY AMTD+ Sbjct: 367 ERIAKLSGGVAVIKVGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESEWEMGYNAMTDK 486 HSP 2 Score: 69.707 bits (169), Expect = 3.524e-59 Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 KYEN++++G+IDPAKVTR ALQNAASV+ MVLTTQAIV +KPK Sbjct: 486 KYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAIVVEKPK 528
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUBA_ARATH (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=At2g28000 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.160e-58 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTD 369 E IAKLS VAVIKVGAAT+T LEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS +PAIK+ EDAD+RLGADIVQKAL++PA+LI+ NAGVE EVVVE + S+W GY AMTD Sbjct: 411 ERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDADERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTD 529 HSP 2 Score: 68.5514 bits (166), Expect = 1.160e-58 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 YEN+ +AG+IDPAKVTR ALQNAASVA MVLTTQAIV KPK Sbjct: 531 YENLFEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 572 HSP 3 Score: 22.3274 bits (46), Expect = 1.160e-58 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 498 RPKIPETAPPQGLM 539 +PK P A P+GLM Sbjct: 572 KPKAPAAAAPEGLM 585
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.737e-56 Identity = 93/119 (78.15%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTD 369 E IAKLS VAVIKVGAAT+T LEDRKLRIEDAKNATFAAIEEGIVPGGGA LVHLS +PAIK+ EDAD RLGADIVQKALVA SLI+ NAG+E EVVVE + SEW GY AMTD Sbjct: 409 ERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVA-QSLIAQNAGIEGEVVVEKIMFSEWELGYNAMTD 526 HSP 2 Score: 70.0922 bits (170), Expect = 1.737e-56 Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 YEN+L+AG+IDPAKVTR ALQNAASVA MVLTTQAIV KPK Sbjct: 528 YENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVDKPK 569 HSP 3 Score: 22.3274 bits (46), Expect = 1.737e-56 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 498 RPKIPETAPPQGLM 539 +PK P A P+GLM Sbjct: 569 KPKAPAAAAPEGLM 582
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUBA_RICCO (RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.596e-50 Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372 E IAKLS VAVIKVGAAT+T LEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS VPAI + +DAD+RLGADI+QKALVAPASLI+ NAG+E EVVVE VK EW GY AMTD+ Sbjct: 354 ERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAINGEDKDADERLGADILQKALVAPASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDK 473 HSP 2 Score: 42.743 bits (99), Expect = 2.596e-50 Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 2 Query: 371 KYENMLQAGIIDPAKVTRSALQN 439 KYEN+++AG+IDPAKVTR ALQN Sbjct: 473 KYENLVEAGVIDPAKVTRCALQN 495
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: RUBA_CHLRE (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.497e-47 Identity = 82/121 (67.77%), Postives = 97/121 (80.17%), Query Frame = 1 Query: 13 EEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQV 375 E IAKLS VAVIKVGAAT+ LEDRKLRIEDAKNATFAA+EEGIVPGGGAAL+HLS+ VPA K+ L DA+++LGADIV K+L AP LI+ NAGVE EV+V+ + + GY AM D+V Sbjct: 400 ERIAKLSGGVAVIKVGAATEAELEDRKLRIEDAKNATFAAVEEGIVPGGGAALLHLSELVPAFKETLTDAEEKLGADIVMKSLRAPCRLIADNAGVEGEVIVQRLLGKPFEVGYNAMIDKV 520 HSP 2 Score: 54.6842 bits (130), Expect = 1.497e-47 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 2 Query: 371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPK 499 K EN+L AG+IDPAKVTR+ L N+ S+A ++LTTQA++ +K K Sbjct: 519 KVENLLDAGVIDPAKVTRNGLLNSVSIAGIMLTTQAVMVEKHK 561
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.070e-43 Identity = 68/121 (56.20%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372 +E IAKL+ VAVIKVGAAT+T L+DRKLRIEDA NAT AA+EEGIVPGGG L+HLS V +K L + ++++GADIV++AL AP + I++N+GVE V+VE V+ ++++ GY +T + Sbjct: 364 QERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTDFSVGYNVITGE 484 HSP 2 Score: 60.8474 bits (146), Expect = 2.070e-43 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 2 Query: 371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQNTRNRSAPRSYGG 544 +YE+++ AGI+DPA V RSALQNA S+A MVLTT+A+V +KP+ + +AP GG Sbjct: 484 EYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPE----KKGAAPDMDGG 537
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.722e-42 Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMT 366 +E IAKL+ VAVIKVGAAT+T L+DRKLRIEDA NAT AA+EEGIVPGGGA L+HLS +PA K L +A++++GADIV +AL AP I+HNAG+E VVVE V + E G+ A+T Sbjct: 365 QERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKANL-NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEKEMPFGFDALT 482 HSP 2 Score: 59.6918 bits (143), Expect = 1.722e-42 Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQK--PKTQNTRNRS 523 Y +M GI+DPAKV RSALQNAAS+A M LTT+AIV +K PKT+ +RS Sbjct: 485 YVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTEAIVVEKPEPKTKTGASRS 536
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.722e-42 Identity = 74/119 (62.18%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMT 366 +E IAKL+ VAVIKVGAAT+T L+DRKLRIEDA NAT AA+EEGIVPGGGA L+HLS +PA K KL +A++++GA+IV +AL AP I+HNAG+E VVVE V + E G+ A+T Sbjct: 365 QERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKAKL-NAEEQVGAEIVYRALQAPLFQIAHNAGLEGSVVVEKVLEKEMPFGFDALT 482 HSP 2 Score: 58.5362 bits (140), Expect = 1.722e-42 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 2 Query: 374 YENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQNTRNRSAPR 532 Y +M GI+DPAKV RSALQNAAS+A M LTT+AIV +KP+ + SAP+ Sbjct: 485 YVDMFAQGIVDPAKVVRSALQNAASIAGMYLTTEAIVVEKPEPKPAAG-SAPK 536 The following BLAST results are available for this feature:
BLAST of EY684207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684207 ID=EY684207; Name=EY684207; organism=Citrus sinensis; type=EST; length=927bpback to top |