EY684206

Overview
NameEY684206
Unique NameEY684206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: PREA_CYAPA (Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.270e-35
Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1
Query:    1 YKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            YKTASL+AAS+K AA+ S VD +++  +Y YGR+LGL+FQIVDDILDFT S E+LGKP+ SDL KGNLTAPV+FALE+  +L  +I+ +F E    +  +++V+ +  IEK +ELA E A +AI  L  LP S  + AL+ +  + LER
Sbjct:  173 YKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALKLITKYVLER 321          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: PREA_SYNY3 (Prenyl transferase OS=Synechocystis sp. (strain PCC 6803) GN=preA PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33
Identity = 74/149 (49.66%), Postives = 101/149 (67.79%), Query Frame = 1
Query:    1 YKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            +KTASLIA S K A + S     +   +YEYG++LGL+FQIVDDILDFT   E LGKPA SDL  GN+TAP +FA+EK P L ++IE EF + G L++A++LV+   GI +++ELA  +A LA  +L  L  S  R +L ++V + L R
Sbjct:  173 FKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQHLSVLEMSAPRESLLELVDYVLGR 321          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: PREA_PORYE (Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32
Identity = 68/149 (45.64%), Postives = 105/149 (70.47%), Query Frame = 1
Query:    1 YKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            YKTASLIAAS +GAA+ +G +  ++  +Y YG+++GL+FQI+DD+LD T S + LGKPA +DL  GNLT+P++F+L +E  L ++I+ EFC +  +   + L+K SGGI KA++LAKE+   A+  L  LP+S    +L+++  F + R
Sbjct:  173 YKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPAGADLINGNLTSPLLFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFLPQSTPVSSLKELTHFIITR 321          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: PREA_CYACA (Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.771e-32
Identity = 74/149 (49.66%), Postives = 98/149 (65.77%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 450
            KTASLIAAS K   + S  D SL+ + Y YG+NLGL+FQI+DDILD T S+  LGK   SDL  GNLTAPV+FAL K  KL +IIE EFCE   + EAI ++K +  IE++ +LA E    AI+++  LP S  + +L ++    L R+
Sbjct:  174 KTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSEKDSLIEIAYDLLNRY 322          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: PREA_PORPU (Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.381e-31
Identity = 66/149 (44.30%), Postives = 103/149 (69.13%), Query Frame = 1
Query:    1 YKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            YKTASL+AAS +GAA+ + ++  +   +Y YG+++GL+FQI+DD+LD   S + LGKP+ +D   GNLTAP++FAL +E KL ++I+ EF +   +  A+ L+K SGGI KA++LAKE+   A+  L  LP+S    +L+++  F + R
Sbjct:  173 YKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQFLPKSAPVSSLKELTHFIITR 321          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: DPS1_DICDI (Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFR 408
            KT SLI  S + AAI SG D ++     E+G+NLGL+FQIVDD+LD+T SAE+ GK  + DL  G  TAPV++A ++ P+L ++I+ +F E G ++EA +LV  S GIEK + LA E  N AI +L  LP+S  R
Sbjct:  307 KTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQSESR 441          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: COQ1_YARLI (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Yarrowia lipolytica GN=COQ1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 62/148 (41.89%), Postives = 96/148 (64.86%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            KTASL++ S + AA+ SG    +    Y++G+NLGL FQ+VDD+LD+++    LGKPA +DL  G  TAPV+FA EK P+L ++I+ +F   G ++ A  LV+ + G+ + +ELA++  + A+ NL  LP S  R AL ++ M  + R
Sbjct:  303 KTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLLPYSESREALRNLTMKMMNR 450          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: COQ1_YEAST (Hexaprenyl pyrophosphate synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=COQ1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 64/140 (45.71%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLH-CLPRSPFRVALE 420
            KTA+LI+ S + AAI SG   ++  + Y++GRNLG+ FQ+VDD+LDFT S + LGKP+ +DL  G  TAPV+FA +++P L  +I   F E G +++ I  V+   GI K + LA+E  + A+ NL   LP S  R ALE
Sbjct:  323 KTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDARSALE 462          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: COQ1_NEUCR (Probable hexaprenyl pyrophosphate synthetase, mitochondrial OS=Neurospora crassa GN=NCU02305 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 447
            KTASLI+ S + +A+  G D +     Y YG+NLGL+FQ+VDD+LD+T+S ++LGKPA +DL  G  TAP++FA +  P+L  ++  +F + G    A +LV  S GIE+ + LA++ A  AI  +   P S  +  L +M +  L+R
Sbjct:  300 KTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKDGLIEMAVKTLKR 447          
BLAST of EY684206 vs. ExPASy Swiss-Prot
Match: DPS1_HUMAN (Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.414e-22
Identity = 54/138 (39.13%), Postives = 86/138 (62.32%), Query Frame = 1
Query:    4 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEKAQELAKEKANLAIHNLHCLPRSPFRVAL 417
            KTASLIA S K  ++    D  + +  Y+YG+N+G++FQ++DD+LDFT  ++Q+GKP ++DL  G  T PV+FA ++ P++  +I   F   G +D A + V  S G+++   LA++  + AI  +  L  SP R AL
Sbjct:  266 KTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERDAL 403          
The following BLAST results are available for this feature:
BLAST of EY684206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PREA_CYAPA4.270e-3552.35Prenyl transferase OS=Cyanophora paradoxa GN=preA ... [more]
PREA_SYNY35.220e-3349.66Prenyl transferase OS=Synechocystis sp. (strain PC... [more]
PREA_PORYE1.163e-3245.64Prenyl transferase OS=Porphyra yezoensis GN=preA P... [more]
PREA_CYACA5.771e-3249.66Prenyl transferase OS=Cyanidium caldarium GN=preA ... [more]
PREA_PORPU6.381e-3144.30Prenyl transferase OS=Porphyra purpurea GN=preA PE... [more]
DPS1_DICDI2.509e-2748.89Decaprenyl-diphosphate synthase OS=Dictyostelium d... [more]
COQ1_YARLI1.626e-2641.89Probable hexaprenyl pyrophosphate synthetase, mito... [more]
COQ1_YEAST4.732e-2645.71Hexaprenyl pyrophosphate synthetase, mitochondrial... [more]
COQ1_NEUCR2.597e-2441.22Probable hexaprenyl pyrophosphate synthetase, mito... [more]
DPS1_HUMAN5.414e-2239.13Decaprenyl-diphosphate synthase subunit 1 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-C12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684206 ID=EY684206; Name=EY684206; organism=Citrus sinensis; type=EST; length=889bp
TATAAAACAGCCTCCTTAATTGCTGCTAGTACCAAAGGAGCTGCTATTTT
TAGTGGGGTTGACGGCAGTTTGTCCAAGCAAATGTATGAATATGGTAGGA
ATCTTGGTCTGTCTTTCCAGATTGTCGACGACATATTGGATTTCACACAG
TCAGCAGAGCAGCTGGGTAAGCCAGCAGCCAGTGACCTGGCAAAAGGAAA
CCTGACAGCACCGGTTATATTTGCTCTAGAGAAAGAGCCAAAATTGAGAG
AAATCATTGAATCTGAATTCTGTGAGACTGGTTCCCTCGATGAAGCCATT
AAGTTGGTTAAGACTTCAGGAGGCATTGAGAAGGCACAAGAATTAGCGAA
AGAGAAGGCCAATCTTGCAATTCATAACCTCCATTGTCTTCCTCGGAGTC
CCTTTCGAGTGGCTCTCGAGGATATGGTGATGTTCAATCTTGAAAGATTT
GTTTAGTTCAAAATTAGTTTACCACGCGTGTTACTTCTTGACAGAAAACA
CCCATTTAAGAGGATACACAAGGACAAGGAAATGAAAGTTGAAGCAAAAG
CCTCTAACAGTGTTGACTGTGCCTTTCTCATGTTCACCCTCAGAAATTTC
TACCAAAGCCAACCTGGCTCGTGCCTGGTTGAAAATTCATATAAGGAATT
GAGCTATGAATTTTGGCTCATAAAATTTGTTTATTCCAGCCCCTGGCCTC
GACTTGGGAAGCAAAAAAAAAAATCCATAAACCATTTGGTGGAACAATAC
AGCTAAAAGGGGCCTTTAAACAGAATAAAATAAGAAAATAAAAAAATAAT
AGAATTATCACTCTCGAAAGACAAATAGGAAGAAAGGGGACGGGGAGAGA
GATAGTATGGAGATGAGAGCTTCGGTAACATGCCAAACA
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