EY684191

Overview
NameEY684191
Unique NameEY684191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 9.525e-87
Identity = 155/176 (88.07%), Postives = 156/176 (88.64%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 9.525e-87
Identity = 155/176 (88.07%), Postives = 156/176 (88.64%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 9.525e-87
Identity = 155/176 (88.07%), Postives = 156/176 (88.64%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.620e-86
Identity = 154/176 (87.50%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.727e-86
Identity = 154/176 (87.50%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 4.727e-86
Identity = 154/176 (87.50%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMP D TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 8.064e-86
Identity = 153/176 (86.93%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPGD TVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL+DNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.053e-85
Identity = 153/176 (86.93%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQ DGQMPGD T+GGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.053e-85
Identity = 153/176 (86.93%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQ DGQMPGD T+GGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
[Close]
BLAST of EY684191 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.053e-85
Identity = 153/176 (86.93%), Postives = 155/176 (88.07%), Query Frame = 3 
Query:   78 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKPGFTVYPFPQ 605
            MRECIS+HIGQAGIQVGNACWELYCLEHGIQ DGQMPGD T+GGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSK GFTVYP PQ
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
The following BLAST results are available for this feature:
BLAST of EY684191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
TBA_PRUDU9.525e-8788.07Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ... [more]
TBA6_ARATH9.525e-8788.07Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=T... [more]
TBA3_HORVU9.525e-8788.07Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 ... [more]
TBA1_PEA3.620e-8687.50Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE... [more]
TBA2_ORYSJ4.727e-8687.50Tubulin alpha-2 chain OS=Oryza sativa subsp. japon... [more]
TBA2_ARATH4.727e-8687.50Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thali... [more]
TBA2_HORVU8.064e-8686.93Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 ... [more]
TBA2_MAIZE1.053e-8586.93Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV... [more]
TBA1_MAIZE1.053e-8586.93Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV... [more]
TBA1_ELEIN1.053e-8586.93Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-B07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684191 ID=EY684191; Name=EY684191; organism=Citrus sinensis; type=EST; length=984bp
AAACGCCGGTATTGCGAAATCCCTCTAAGAATTGTTGTTATAGCTTTCAA
TTCAAATTCAAGAATCGATCTTGGAAAATGAGAGAGTGCATTAGCGTTCA
CATCGGTCAGGCCGGTATCCAGGTCGGAAATGCATGCTGGGAACTTTACT
GCCTCGAGCATGGCATTCAGCCTGATGGCCAGATGCCGGGTGATACGACC
GTAGGCGGAGGAGATGATGCCTTCAACACCTTTTTCAGTGAAACTGGTGC
AGGGAAGCATGTTCCTCGTGCTGTTTTTGTTGATCTGGAGCCCACTGTTA
TTGATGAAGTTAGGACTGGAACTTACCGCCAACTCTTCCATCCTGAACAA
CTCATCAGCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGCCACTA
CACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAGAAAAC
TTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATGCTGTT
GGAGGTGGTACTGGCTCTGGACTTGGGTCCCTTCTCTTGGAGCGTCTCTC
TGTTGACTATGGAAAGAAATCAAAGCCTGGTTTCACTGTGTATCCCTTCC
CTCAGGGTTTCCCCATCCGTTGGGGAACCTTACAACAGTGGTTCTTTCCA
CACATTCCCTCCTTGAACACACCCAAGGTTGCTGGTGCTTCTTGAAAAAG
GAACCCATCTTAGGAATATTTGCCGGGCGCTTTCCTTGACATTTGAACCG
CCCCCATTTACACCCAATCCCCCAACCGAATGGGGCCCCCCAGGGGGAAT
CCCACCCCCCTTACCGGCCTTTTTTTGAGGGTTGAGAGGGAACCTCCTAA
ATGGGGAAGGTGGGATGAAAATTCTCCCAAACAAAATTTGGGTTTCCCTC
ATTCCCAGGAGGGGACCCTTTTTCTTGGGCGCCCCCCTCCTTTTTGGGCC
CCACCGCTATTTTATCCCCTCGGGGCTGAAGAAG
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