EY684167

Overview
NameEY684167
Unique NameEY684167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684167 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.510e-35
Identity = 77/118 (65.25%), Postives = 92/118 (77.97%), Query Frame = 1
Query:   31 QLQTILGSLSGSAQEKMTALFEALFDGAEKGFSKEVVKKKNFLGAAVAEDEGLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYLVQWYQEGLKGGNQNSQIWNNATPF 384
            +L + L +L   AQEKM+AL EALF+G EKGF +E +KKKN+  AAVAE EG Q+LLL AIE FC K +S A KEVALVLK LYD+DVLEEE +V WYQ+GLKG N+NS+IW NA PF
Sbjct:  313 ELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAE-EGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPF 429          
BLAST of EY684167 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.857e-30
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1
Query:   34 LQTILGSLSGSAQEKMTALFEALFDGAEKGFSKEVVKKKNFLGAAVA-EDEGLQLLLLRAIEAFCGKSSSY-ATKEVALVLKALYDSDVLEEEYLVQWYQEGLKGGNQNSQIWNNATPF 384
            L++ + SLS   Q+ M ALF ALFDG  KGF+KEV KKKN+L AA   +++G Q+ LL +I  FCGK+ +  A KEVALVLKALYD D++EEE ++ WY++GL G +++S +W N  PF
Sbjct:  304 LKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPF 422          

HSP 2 Score: 28.1054 bits (61), Expect = 1.857e-30
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  377 RPFIEWLHSAELESGE 424
            +PF+EWL SAE ES E
Sbjct:  420 KPFVEWLQSAESESEE 435          
BLAST of EY684167 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.220e-26
Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = 1
Query:   31 QLQTILGSLSGSAQEKMTALFEALFDGAEKGFSKEVVKKKNFLGAAVAEDEGL----QLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYLVQWYQEGLKGGNQNSQIWNNATPF 384
            QL+T L S S + QEKM ALF ALF G  KGF+KEV+KKK +L A +   E      Q+ LL  IE+FC K+S+ A KEVALV+K LYD D+L+E+ +V+WY +G+K    +S +  N TPF
Sbjct:  308 QLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKKKYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNKGVK----SSPVLKNVTPF 425          

HSP 2 Score: 26.5646 bits (57), Expect = 3.220e-26
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  380 PFIEWLHSAELESGE 424
            PFIEWL +AE ES E
Sbjct:  424 PFIEWLQNAESESEE 438          
BLAST of EY684167 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.650e-25
Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = 1
Query:   22 TGMQLQTILGSLSGSAQEKMTALFEALFDGAEKGFSKEVVKKKNFLGAAVAEDEGLQLLLLRAIEAFCGKSSSYATKEVALVLKALYDSDVLEEEYLVQWYQEGLKGGNQNSQIWNNATPF 384
            T  QL+ +L S +   Q+ M A  EALF G  KGF+KEVVK K +L  AV  DEG Q LL++AIEAF GK +  A KEV +VLKALYD D+L+EE +V WY + +  G ++SQ+  NA PF
Sbjct:  317 TPSQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNKKYLAVAVP-DEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDAVAAG-KDSQVVKNAKPF 435          

HSP 2 Score: 24.2534 bits (51), Expect = 2.650e-25
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  377 RPFIEWLHSAE 409
            +PF+EWL SAE
Sbjct:  433 KPFVEWLQSAE 443          
The following BLAST results are available for this feature:
BLAST of EY684167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IF5_PHAVU6.510e-3565.25Eukaryotic translation initiation factor 5 OS=Phas... [more]
IF5Z_ARATH1.857e-3052.94Probable eukaryotic translation initiation factor ... [more]
IF5Y_ARATH3.220e-2650.82Probable eukaryotic translation initiation factor ... [more]
IF5_MAIZE2.650e-2552.07Eukaryotic translation initiation factor 5 OS=Zea ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-H04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684167 ID=EY684167; Name=EY684167; organism=Citrus sinensis; type=EST; length=985bp
CTCACGCGTCCGGAAAGTATTACTGGGATGCAATTGCAAACTATTCTGGG
ATCTCTCTCTGGATCTGCTCAGGAAAAGATGACTGCGCTGTTTGAGGCAC
TTTTTGATGGCGCTGAGAAAGGATTTTCCAAGGAAGTTGTCAAGAAGAAG
AACTTCCTTGGTGCTGCTGTTGCTGAGGATGAGGGTTTGCAATTGCTTCT
GCTCCGAGCAATTGAGGCATTCTGTGGGAAGTCAAGCTCATATGCGACAA
AGGAAGTGGCTTTGGTTCTGAAGGCTCTGTATGACTCTGATGTGTTGGAG
GAAGAGTATTTAGTGCAATGGTATCAAGAGGGGCTGAAAGGAGGCAACCA
AAACTCCCAGATTTGGAACAATGCCACGCCCTTTTATTGAGTGGCTTCAC
AGCGCTGAATTAGAATCTGGAGAAGTAATGAGTGAATGTTTCTTATTTGG
AGGATCCTGTTTTGCCATTTGGGGGAATGAATAAAAACCGTATGGGAGGC
AGTTTTTCAAGATATAACTGCACCCTGGGTGAGAATAATTAGTCTGGTTT
GTTTGTTTTAAATAAAAAAAAAAATATGGGGGGCGCCTCCAGAAGGATCA
AATCCTACAAACGCCTTGCATGCCTACATCCTAAGCCCCTCCCATAGGGC
TCCCTAAAGTTTCATCCACTGGGCGCATCAGTTTGCCACGCACCTTACGC
CGGGAACATCCCTCGGACATATCCCAAAGATAATCACCCCTGGCGCATCA
CTACCCCATGTATTCCTCTCGGTGGGTTGAATAGGCACAAAAGAACCGGA
CACTGTCTGTCCCCTAACCATTCTGTGTAGGCTAGACCTGAATGATGTAA
GAAAGCGAGACTCTGCCCTTCTTGACAGCGCATAATTTATTCCTGGCGGC
CGTGGTAATTATGAATAGTAGCCGTGATATGGTATGACGGTGTACGGCCG
TGAGCTAGTATAGAATTGCGTGGCTACAGAAGACG
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