EY684160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684160 vs. ExPASy Swiss-Prot
Match: C3H30_ORYSJ (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 8.762e-38 Identity = 74/134 (55.22%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 196 MRGLHKSKRISWAPDVNLCQERLFLSEESPSQIGLGAQDHLQAKSSWLSHSNGVGNDDILPPGFEGGHPPNQFQVNLSEIPLIKWRCPPRFQLDITWQVCLLGEESQKVEI*NPRERRVLEAVYPRPSAIPPKP 597 M G +S+R+SWA NLC+ RLFLSE+SPSQ GL QD+LQAK SWL H+ G +DD LPPGFE P N ++++S+IPLI+W+CPP L+ W + + GEES+++EI N R LEA+YPRPS IPP P Sbjct: 1 MMGSRRSRRVSWASGGNLCKVRLFLSEDSPSQAGLRPQDNLQAKGSWLLHAAGPSSDDSLPPGFESLPPSNDLKIDMSQIPLIRWKCPPHIVLEQDWHI-VAGEESREIEIQNERINGALEAIYPRPSNIPPNP 133
BLAST of EY684160 vs. ExPASy Swiss-Prot
Match: C3H6_ARATH (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g19860 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 7.676e-34 Identity = 76/134 (56.72%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 196 MRGLHKSKRISWAPDVNLCQERLFLSEESPSQIGLGAQDHLQAKSSWLSHSNGVGNDDILPPGFEGGHPPNQFQVNLSEIPLIKWRCPPRFQLDITWQVCLLGEESQKVEI*NPRERRVLEAVYPRPSAIPPKP 597 MR LHK R+SW PD LCQ RLF+SE+SPSQ+G +QDHLQAKS SH +DD LPPGF G N+ Q+ LS+IPLIKW+C + LD W+V + G+ES++VE N RE RVLEA YP S+IPP P Sbjct: 1 MRALHK--RVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP----SDDNLPPGFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKV-VAGDESKEVEAQNERELRVLEAFYPGASSIPPNP 127
BLAST of EY684160 vs. ExPASy Swiss-Prot
Match: C3H45_ARATH (Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana GN=At3g51180 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.608e-15 Identity = 52/130 (40.00%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 211 KSKRISWAPDVNLCQERLFLSEESPSQIGLGAQDHLQAKSSWLSHSNGVGNDDILPPGFEGGHPPNQFQVNLSEIPLIKW-RCPPRFQLDITWQVCLLGEESQKVEI*NPRERRVLEAVYPRPSAIPPKP 597 K R+SW P LCQ ++F +E+SP+ + Q H S+ + LPPGFEG H + N+S IP IKW R PP+F ++ TW V G S + + N R +VLEA+YP SAIP +P Sbjct: 8 KKPRVSWPPGPKLCQVKVFRTEDSPANVASQPQRH--------SYPSRKPRGPDLPPGFEGNH--YAVKPNVSNIPRIKWKRPPPKFSVNDTWLVG-CGGGSSEWQNENLRISKVLEAIYPHRSAIPSRP 126 The following BLAST results are available for this feature:
BLAST of EY684160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684160 ID=EY684160; Name=EY684160; organism=Citrus sinensis; type=EST; length=1032bpback to top |