EY684157

Overview
NameEY684157
Unique NameEY684157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1048
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684157 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 3.157e-51
Identity = 107/180 (59.44%), Postives = 128/180 (71.11%), Query Frame = 3
Query:    3 DAWVHAHRNLDEIEREKICSSMDPLKISYESRIHASHNKRLPVHIVLHALYYDQLKLRSGLDNDRS-----TPDAASTTNQLQAHVSLIKENEELRSELTRMNLYISDMQKGNN--QAXXXXXXXXXXXXXXXXXFFSSMSKTFGKLNPFKHGSKDTSNIDDDLAAMDGTKPRTRKFSIS 521
            D ++ AH NLDEIEREK+CSSMDPLK+SY++R+HAS NKRLPV+IVLHALYYDQLKLRSG+           P+A  T +QLQA  +L KENE LRSEL +M +Y+SDMQK  N   A                 FFSS+SK  GKLNPFK+GSKDTS+ID+DL  +D TKPR R+FSIS
Sbjct:  414 DIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLKLRSGVAEQEERAVVVLPEALKTRSQLQADTTLAKENEALRSELMKMKMYVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPFKNGSKDTSHIDEDLGGVDITKPRRRRFSIS 593          
BLAST of EY684157 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.979e-14
Identity = 50/169 (29.59%), Postives = 83/169 (49.11%), Query Frame = 3
Query:    3 DAWVHAHRNLDEIEREKICSSMDPLKISYESRIHASHNKRLPVHIVLHALYYDQLKLRSGLDNDRSTPDAASTTNQLQA-----------------HVSLIKENEELRSELTRMNLYISDMQKGNNQAXXXXXXXXXXXXXXXXXFFSSMSKTFGKLNPFKHGSKDTSN 458
            D ++ AH+ L + +++K+   +D  K+S E+  HA+ N+RLP+  ++  LY++QLKLRS L +  S  +      Q Q+                 + SL +EN EL+ EL R+ + ++D++K +                    F SS SK  GKL+ F H S   S+
Sbjct:  429 DLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELARLRMRLNDLEKEH------ICMKRDMQRSHSRKFMSSFSKKMGKLSFFGHSSSRGSS 591          
The following BLAST results are available for this feature:
BLAST of EY684157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RPT2_ARATH3.157e-5159.44Root phototropism protein 2 OS=Arabidopsis thalian... [more]
Y5880_ARATH8.979e-1429.59BTB/POZ domain-containing protein At5g48800 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-G03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684157 ID=EY684157; Name=EY684157; organism=Citrus sinensis; type=EST; length=1048bp
CGGACGCGTGGGTGCACGCTCATCGCAATCTCGACGAAATAGAGCGGGAG
AAAATCTGCAGTTCAATGGACCCACTAAAAATATCTTACGAATCTCGAAT
TCACGCATCACATAACAAGCGATTGCCAGTGCATATTGTATTGCATGCCT
TGTATTACGACCAGCTAAAGCTAAGAAGCGGACTGGACAACGATCGGAGC
ACGCCGGATGCCGCATCAACAACGAATCAATTGCAAGCACACGTATCGCT
GATTAAAGAAAACGAAGAATTGAGGTCAGAGCTGACGAGGATGAATCTTT
ATATCTCGGATATGCAGAAAGGTAATAATCAAGCAGGGACAGGTAACTCT
AGTAAGAGTGGTACTAGTGGGCATAAAAAGCACACTTTCTTCTCATCAAT
GTCGAAGACGTTTGGCAAATTGAATCCCTTTAAGCATGGGTCTAAGGATA
CTTCTAATATTGATGATGACCTTGCTGCTATGGATGGTACCAAGCCCAGA
ACGAGAAAGTTCTCCATCTCTTAAGTAAGTGTAATAATAGGAGAATGTTA
CTCTTTATACTTCCGGGGGATCATGGAATCAACTTAAATTGTTTTTCCGA
TTTGTGTGTTATGATTGTTTTTTTTCTTTTTTTCTTTTTTTGGTTTAATT
TTTGGGGTCAATGAATTTTGGGGTAATTAAATGGTTAAATTTTTTGGATT
GGTACTGGAAAGGTAGAAAAAAAAATTAATCCCAAAATAAAACCTTTTGG
TAAAATTTTAATAACCTCCTAAATTTCAACCTTTTTCCTTTGGCTATATT
ATTTAAATCCTAATGGAAATTTTTTTACCCCCTTTCCCAATGGAGAAAGG
GGGCTATTTCCCACCCAAGAGAAATATGGCGGGGGGGGTTTTTAAACACC
AACAATCAATTTTCATGAGGATTATTCCAAACGCTCTATACTAGGGGAGA
GGAAGAGGTGGGGGGGTGGTTCTAAGTATTTAACTATGAAGGAGGTGAGA
AAGAATACGCCACTCTCCTGATTTGGTGGGCAACCCCCACAATTTGCT
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