EY684154

Overview
NameEY684154
Unique NameEY684154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684154 vs. ExPASy Swiss-Prot
Match: GGH_ARATH (Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 4.087e-29
Identity = 59/83 (71.08%), Postives = 66/83 (79.52%), Query Frame = 3 
Query:    3 FQWHPQKNDFEWGPKAIPHIEDAIRVTQQAANFFISEARKSSNRPPTRKVLDNLIYNYSPTYCGKAGKGYDEVYIFT*LRPVI 251
            FQWHP+KN FEWG   IPH EDAI+VTQ AAN  +SEARKS NRP ++KVL NLIYNY PTYCG AG GYDEVYIFT  R ++
Sbjct:  265 FQWHPEKNAFEWGSSKIPHSEDAIQVTQHAANHLVSEARKSLNRPESKKVLSNLIYNYKPTYCGYAGIGYDEVYIFTQQRSLL 347
[Close]
BLAST of EY684154 vs. ExPASy Swiss-Prot
Match: GGH_SOYBN (Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.750e-23
Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = 3 
Query:    9 WHPQKNDFEWGPKA-IPHIEDAIRVTQQAANFFISEARKSSNRPPTRKVLDNLIYNYSPTYCGKAGKGYDEVYIF 230
            W P+KN FEW      PH EDAIRVTQ  ANFFISEARKS+N P  +KV D+LIYNY PT+ G AGKGYD+VY+F
Sbjct:  267 WQPEKNAFEWATSLKAPHTEDAIRVTQSTANFFISEARKSTNTPDAQKVRDSLIYNYKPTFGGTAGKGYDQVYLF 341
The following BLAST results are available for this feature:
BLAST of EY684154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GGH_ARATH4.087e-2971.08Gamma-glutamyl hydrolase OS=Arabidopsis thaliana G... [more]
GGH_SOYBN9.750e-2366.67Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-F11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684154 ID=EY684154; Name=EY684154; organism=Citrus sinensis; type=EST; length=988bp
CCTTCCAATGGCATCCACAGAAAAATGATTTTGAATGGGGGCCAAAAGCA
ATTCCACACATAGAGGATGCCATTCGGGTGACTCAACAAGCTGCAAACTT
TTTTATAAGCGAGGCTAGGAAGTCATCAAACAGGCCACCTACTCGAAAAG
TACTTGACAACCTCATTTACAATTACAGTCCCACCTACTGCGGGAAGGCT
GGGAAGGGATATGACGAGGTTTACATCTTTACCTAACTTCGACCAGTAAT
TCTGAGAAGGTTGCCAGTTTTTGCAGATAGTTACATTAAATGCCAACAGT
TTCATGTTATTCCCATCCAAATACAATGAGATACTTTGACATGTCATGGA
AGAAGATGGATTCATCAAGGAACTAAGTATTACAAAATCAGAAGACTATG
TCTACTTCATCAAGAAAAAGTTGCTTTAACTCAGTTGGATTGAGGAACCA
ACGCTTCCAAATGTAGTGTTTGAAGTGTCAAGAATTGTGAGAGATGTCAA
AATGAAACTAGTTTGGACAAACGGGAGATTTCAAAATGGAAGCTAACCAT
CGAATTAAAGGGAGAAGGCTGAAACCTGAAAAAATTTGAAAATAAATCAA
AGCTGTTTGAATTTCGGGGAATAATCGACTAACTTCCTTTTCCTTTAAAC
CCTTGACTAAAAATTTACGGGTTAACAACTAATTGGGGTGGAACTTGAAG
AAAAATAGGAAGCCTTGGAGATTCCGAAAGGGAGGATGAAAGAAAACAAG
AAAACCCCAAGAAGGAAAAAAAATTTTCCCCCAAACAATTTTTTAAAAAA
AAGCATGGGTTTTTCCAAAAAAATTCATTTGTGTGAACTTGGCGACTACC
AACTTTTTAATAACAATATAATGAAATGGGGTTTTTTTGAAATATTTTGG
GATTTTTGCCCATACACTGAGAAATAATATATTCGTTTTCGGGCCTTCGC
AAGTTGTATTTAAAAAAAAGAAAAAATAAAAAAAAAAA
back to top