EY684142

Overview
NameEY684142
Unique NameEY684142
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684142 vs. ExPASy Swiss-Prot
Match: SIZ1_ARATH (E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.858e-50
Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 1
Query:    4 LTELEVKPDGSWRVKTRSESDRREIGDLASWHFPDGSLCAPAGGEDKPKVEMLKHVKQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNNGIEHDSMSLNVDPTYAFADGN 483
            +TE+EVKPDGSWRVK + ES+RRE+G+L+ WH PDGSLC P+  + K K+EML  VKQEG S+G   LKLGIRKNRNG+WEVSKP + NG S S  QEK    +  +IPMSSSATGSGRDG+DASVNQD  GTFDF  NG+E DS+S+NVD  Y F D N
Sbjct:  434 VTEIEVKPDGSWRVKFKRESERRELGELSQWHAPDGSLC-PSAVDIKRKMEMLP-VKQEGYSDGPAPLKLGIRKNRNGIWEVSKP-NTNGLSSSNRQEKVGYQEKNIIPMSSSATGSGRDGDDASVNQDAIGTFDFVANGMELDSISMNVDSGYNFPDRN 590          
BLAST of EY684142 vs. ExPASy Swiss-Prot
Match: SIZ1_ORYSJ (E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.611e-23
Identity = 70/155 (45.16%), Postives = 91/155 (58.71%), Query Frame = 1
Query:    4 LTELEVKPDGSWRVKTRSESDRREIGDLASWHFPDGSLCAPAGGED-KPKVEMLKHVKQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSS--GSRLQEKFENHDL-KVIPMSSSATGSGRDGEDASVNQDVGGTFDFT-NNG-IEHDSMSLN 450
            + E++VKPDGSWRVK  + S      +L+ WH PDG+LC P   ED KP ++       EG S+G   LK+GI++N NG+WEVS   D    S  G+R+Q       L  ++ MS+S T S RDGED SVNQ+     D + NNG  E DS SLN
Sbjct:  435 VNEVDVKPDGSWRVKGDAASR-----ELSQWHMPDGTLCNPK--EDVKPAMQNGNEQMMEGTSDGQKSLKIGIKRNPNGIWEVSSKADDKKPSVVGNRMQNNSGFRALNNIMHMSNSPTSSYRDGEDPSVNQESNRHVDLSLNNGNNEFDSFSLN 582          
BLAST of EY684142 vs. ExPASy Swiss-Prot
Match: SIZ2_ORYSJ (E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp. japonica GN=SIZ2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.881e-17
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    4 LTELEVKPDGSWRVKTRSESDRREIGDLASWHFPDGSLCAPAGGEDKPKVEMLK-HVKQEGVSEGHIG-LKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEK 300
            ++E++VKPDGSWRVK  +E     +  LA WH PDG+LC P     KP + ++K  +K+E +SE   G LKLGIR+N NG WE++K  D N      ++++
Sbjct:  445 VSEIDVKPDGSWRVKGGAE-----LKGLAQWHLPDGTLCMPTDTRSKPNIRIVKQEIKEEPLSEETGGRLKLGIRRNNNGQWEINKRLDSNNGQNGYIEDE 540          
The following BLAST results are available for this feature:
BLAST of EY684142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SIZ1_ARATH1.858e-5065.00E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thalian... [more]
SIZ1_ORYSJ9.611e-2345.16E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp.... [more]
SIZ2_ORYSJ7.881e-1743.56E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-E10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684142 ID=EY684142; Name=EY684142; organism=Citrus sinensis; type=EST; length=975bp
AGACTTACAGAACTTGAGGTGAAGCCTGATGGTTCTTGGCGTGTGAAAAC
TAGAAGCGAAAGTGACCGTCGGGAAATTGGAGATTTAGCGTCCTGGCACT
TTCCTGATGGTTCTCTCTGTGCTCCTGCTGGCGGGGAGGATAAACCAAAA
GTGGAAATGTTGAAGCATGTTAAGCAGGAAGGTGTTTCAGAAGGTCATAT
TGGTTTGAAACTTGGAATCAGGAAGAATCGCAACGGGCTGTGGGAAGTTA
GCAAACCTGAAGACATGAATGGCTCTTCTGGTAGTAGATTACAGGAGAAG
TTTGAAAATCATGATCTGAAAGTCATCCCAATGAGCAGCAGCGCTACTGG
AAGTGGTAGGGATGGTGAAGATGCAAGTGTAAATCAGGATGTTGGTGGAA
CCTTCGATTTCACCAACAATGGAATAGAGCATGATTCTATGTCTTTGAAT
GTTGACCCGACGTATGCATTTGCTGACGGAAATCCCTTGTGCCCCGTTTG
GGAATGCAAAAGTTTTTGTTCTTAGTGATTTCTGAAGAAGAAAATGACCT
CTTCTAATCTTCCGAAAACATATATTAGGGGACACCCAAAAATGATGTCC
GGGGGGGTTCCTTTTTCCGGGGCCCCCCTCCAGGAATTGCCCCATCCCAC
CCCCTAAACTCCTGCCAATTGGGAGCCTTGGGGCGGGGACACCGTGATTT
TAGGTTATTATTGGTTTACTATGAGCAAACAAATTTGGAAATAGGCTATA
TTAGGACCTTATACTACTCGGGAAACTATAAGGAAAATTACATTGCTATC
ACGCGGTATAAATTAAGCTCTAACAGATGATATAAAAGCTTCCACAATAC
TGTTTTTATAGAGATTTTTTTATTCTAAGGACGGTTACGGAGATGAATTA
TCTAACGAAGTNAAAGAACCAGAAAATGAAGATGGGAGATATTATAACAT
ACATTGAGATGAAGACACCNAAAAA
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