EY684123

Overview
NameEY684123
Unique NameEY684123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 7.199e-98
Identity = 185/238 (77.73%), Postives = 203/238 (85.29%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS SF GKAV L+PS +E++  G+++MRKTASK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 7.199e-98
Identity = 183/237 (77.22%), Postives = 201/237 (84.81%), Query Frame = 1
Query:    4 TMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            T ALSS F GKAV L+PS +E++  G+++MRKTASK+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 238          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 2.095e-97
Identity = 185/238 (77.73%), Postives = 202/238 (84.87%), Query Frame = 1
Query:    4 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSSS F GKAV L+PS +E++  GR++MRKTA+K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 4.666e-97
Identity = 183/236 (77.54%), Postives = 198/236 (83.90%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS SF G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 4.666e-97
Identity = 181/236 (76.69%), Postives = 199/236 (84.32%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS SF G+AV L+PS  E++  GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.773e-96
Identity = 182/238 (76.47%), Postives = 201/238 (84.45%), Query Frame = 1
Query:    4 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSSS F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P      + +    P+ FA+L  K   +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-HIKNGRLAMFSMFGF-FVQAIVTGKG 239          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.316e-96
Identity = 180/237 (75.95%), Postives = 200/237 (84.39%), Query Frame = 1
Query:    4 TMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            T ALSS F GKAV L+PS +E++  G+++MRKTA+K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +A+VTG G
Sbjct:    5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQALVTGKG 238          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 5.159e-96
Identity = 182/238 (76.47%), Postives = 200/238 (84.03%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS SF G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 4.367e-95
Identity = 181/238 (76.05%), Postives = 199/238 (83.61%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS SF GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239          
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 7.450e-95
Identity = 182/238 (76.47%), Postives = 197/238 (82.77%), Query Frame = 1
Query:    4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708
            TMALSS S  GKAV L P+ +E+   GRI+MRKTA K  +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPL P      + +    P+ FA+L  K + +  RLAMF M GF   +AIVTG G
Sbjct:    5 TMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239          
The following BLAST results are available for this feature:
BLAST of EY684123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB24_TOBAC7.199e-9877.73Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC7.199e-9877.22Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2G_SOLLC2.095e-9777.73Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2B_SOLLC4.666e-9777.54Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_TOBAC4.666e-9776.69Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB25_TOBAC1.773e-9676.47Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB25_NICPL2.316e-9675.95Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB27_TOBAC5.159e-9676.47Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_PETSP4.367e-9576.05Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB2A_SPIOL7.450e-9576.47Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-D03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684123 ID=EY684123; Name=EY684123; organism=Citrus sinensis; type=EST; length=996bp
CTCACAATGGCTCTCTCCTCATCATTCGTCGGCAAGGCCGTGAACCTCGC
CCCTTCAGGCAATGAGCTAAGCAATGGTGGCCGCATCTCCATGCGTAAAA
CCGCGAGCAAGTCTGTTTCTTCAGGTAGCCCGTGGTACGGCCCAGACAGA
GTCAAGTACTTGGGCCCATTCTCTGGCGAGCCCCCAAGCTACTTGACCGG
TGAGTTCCCTGGCGACTACGGTTGGGACACAGCCGGGCTTTCAGCTGACC
CAGAAACCTTTGCCAAGAACCGTGAACTCGAAGTCATCCACTGCAGATGG
GCCATGTTGGGAGCTCTTGGATGCGTCTTCCCGGAGCTCTTGGCCCGCAA
CGGAGTCAAGTTCGGTGAGGCCGTGTGGTTCAAGGCGGGAGCCCAGATCT
TCAGCGAGGGCGGGCTAGACTACTTGGGAAACCCAAGCTTGATCCACGCC
CAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGGTCTTGATGGGAGCCGT
TGAGGGTTACAGAATTGCTGGAGGGCCGCTCGGTGAAGTGACTGACCCAT
TGTAACCCAGGTGGCAGCTTTGATCCATTTGGGTTTGGCTGATGACCCCG
AAGCTTTTTGCTAAACTCACAGGTAAAGGGAAATCAAGATGGGAAAGGTT
GGCTATGTTCCCCATGGTTGGGTTTTCTTCCTTCCGGGCCATTGTCACCG
GGCCAGGGAACTGTTAGAAAACTTGGGCCAAACTTTTGGTCGAACCCTGG
TGAAACAAAAATAGCCGGGGGCCCTAAAACCCGAAATTTTTAGGCCCGGA
AAATTGGGGTTTTGGCTATAAGTGTTTATGATAAACTGGGGAAATTTTAT
TGTTCAAGAACGATTTTGGATAAATAAGGTGTGAAACTCATATCAACCTT
ATTGACAAAAAAAAATTCGAAAAATGAAAAAGGGGCTAGAGAATACACCG
ACAAAATGTAAAAAAGGGATATATTAGATATATTTGTATGCTACCG
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