EY684123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 7.199e-98 Identity = 185/238 (77.73%), Postives = 203/238 (85.29%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS SF GKAV L+PS +E++ G+++MRKTASK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 7.199e-98 Identity = 183/237 (77.22%), Postives = 201/237 (84.81%), Query Frame = 1 Query: 4 TMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 T ALSS F GKAV L+PS +E++ G+++MRKTASK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 238
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 2.095e-97 Identity = 185/238 (77.73%), Postives = 202/238 (84.87%), Query Frame = 1 Query: 4 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSSS F GKAV L+PS +E++ GR++MRKTA+K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 4.666e-97 Identity = 183/236 (77.54%), Postives = 198/236 (83.90%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 4.666e-97 Identity = 181/236 (76.69%), Postives = 199/236 (84.32%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.773e-96 Identity = 182/238 (76.47%), Postives = 201/238 (84.45%), Query Frame = 1 Query: 4 TMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P + + P+ FA+L K + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-HIKNGRLAMFSMFGF-FVQAIVTGKG 239
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 2.316e-96 Identity = 180/237 (75.95%), Postives = 200/237 (84.39%), Query Frame = 1 Query: 4 TMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 T ALSS F GKAV L+PS +E++ G+++MRKTA+K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPL P + + P+ FA+L K + + RLAMF M GF +A+VTG G Sbjct: 5 TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGL-AEDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQALVTGKG 238
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 5.159e-96 Identity = 182/238 (76.47%), Postives = 200/238 (84.03%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 4.367e-95 Identity = 181/238 (76.05%), Postives = 199/238 (83.61%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 7.450e-95 Identity = 182/238 (76.47%), Postives = 197/238 (82.77%), Query Frame = 1 Query: 4 TMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 TMALSS S GKAV L P+ +E+ GRI+MRKTA K +V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 5 TMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 239 The following BLAST results are available for this feature:
BLAST of EY684123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684123 ID=EY684123; Name=EY684123; organism=Citrus sinensis; type=EST; length=996bpback to top |