EY684116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 6.499e-62 Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFY-GKAAQ 419 FYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLAD+Y+SEAALG+AN DAI+ G FY G+AAQ Sbjct: 303 FYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQ 442 HSP 2 Score: 45.0542 bits (105), Expect = 6.499e-62 Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 1 Query: 427 NVPVPERCTDPTAENFDPTARNDE 498 NVPVPE CTDP A N+DPTAR+D+ Sbjct: 446 NVPVPEGCTDPQATNYDPTARSDD 469
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.105e-61 Identity = 99/139 (71.22%), Postives = 119/139 (85.61%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYGKAAQ 419 FYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG+ AQ Sbjct: 294 FYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQ 432 HSP 2 Score: 46.2098 bits (108), Expect = 1.105e-61 Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1 Query: 427 NVPVPERCTDPTAENFDPTARNDE 498 N+PVPE CTDP A+NFDPTAR+D+ Sbjct: 436 NLPVPEGCTDPVAKNFDPTARSDD 459
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 3.193e-61 Identity = 101/139 (72.66%), Postives = 110/139 (79.14%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYGKAAQ 419 FYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR + LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYGK AQ Sbjct: 303 FYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQ 441 HSP 2 Score: 51.2174 bits (121), Expect = 3.193e-61 Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 1 Query: 409 KQPKQMNVPVPERCTDPTAENFDPTARNDE 498 K +Q+N+PVPE CTDP AENFDPTAR+D+ Sbjct: 438 KGAQQVNLPVPEGCTDPVAENFDPTARSDD 467
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.311e-59 Identity = 98/139 (70.50%), Postives = 118/139 (84.89%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYGKAAQ 419 FYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR W LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYGK AQ Sbjct: 293 FYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQ 431 HSP 2 Score: 41.5874 bits (96), Expect = 1.311e-59 Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 1 Query: 409 KQPKQMNVPVPERCTDPTAENFDPTARNDE 498 K +Q +PVPE CTD A+N+DPTAR+D+ Sbjct: 428 KGAQQGTLPVPEGCTDQNAKNYDPTARSDD 457
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.552e-57 Identity = 97/139 (69.78%), Postives = 109/139 (78.42%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYGKAAQ 419 FYWAPTREDRIGVC GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVR W LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI G F+GKAAQ Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQ 439 HSP 2 Score: 42.3578 bits (98), Expect = 1.552e-57 Identity = 16/30 (53.33%), Postives = 25/30 (83.33%), Query Frame = 1 Query: 409 KQPKQMNVPVPERCTDPTAENFDPTARNDE 498 K +Q+++PV + CTDP A+N+DPTAR+D+ Sbjct: 436 KAAQQVSLPVAQGCTDPEAKNYDPTARSDD 465
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 4.053e-56 Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYG 407 FYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLAD+YLSEAALG+AN+DA+ +G FYG Sbjct: 303 FYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 2.224e-54 Identity = 101/136 (74.26%), Postives = 116/136 (85.29%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFYGK 410 FYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLAD+YLSEAALG+AN DA+++G FYGK Sbjct: 290 FYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 7.155e-53 Identity = 99/133 (74.44%), Postives = 112/133 (84.21%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNF 401 FYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLAD+Y+SEAALG+AN DAI+ G F Sbjct: 303 FYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.220e-52 Identity = 97/134 (72.39%), Postives = 113/134 (84.33%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNFY 404 FYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLAD+YL+EAALG AN DAI+SG+F+ Sbjct: 305 FYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of EY684116 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.082e-52 Identity = 98/133 (73.68%), Postives = 111/133 (83.46%), Query Frame = 3 Query: 3 FYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADEYLSEAALGEANADAIQSGNF 401 FYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLA+ YL EAALG+ANADAI +GNF Sbjct: 307 FYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439 The following BLAST results are available for this feature:
BLAST of EY684116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684116 ID=EY684116; Name=EY684116; organism=Citrus sinensis; type=EST; length=1014bpback to top |