EY684107

Overview
NameEY684107
Unique NameEY684107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1078
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.070e-70
Identity = 107/120 (89.17%), Postives = 112/120 (93.33%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MATSAI+QSAFAGQTAL+  NE VRK+G  +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSK
Sbjct:    1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

HSP 2 Score: 63.929 bits (154), Expect = 1.070e-70
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGVKFGEAVWFKAG+QIFSEGGLDYLG P
Sbjct:  120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 4.034e-70
Identity = 108/120 (90.00%), Postives = 111/120 (92.50%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MATSAIQQSAFAGQTAL+  NE VRK+G   GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSK
Sbjct:    1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

HSP 2 Score: 61.6178 bits (148), Expect = 4.034e-70
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGV FGEAVWFKAG+QIFSEGGLDYLG P
Sbjct:  120 KNGVTFGEAVWFKAGSQIFSEGGLDYLGNP 149
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 7.507e-69
Identity = 104/120 (86.67%), Postives = 112/120 (93.33%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MATS IQQSAFAGQT L+  NE VRKVG  +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+K
Sbjct:    1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAK 119

HSP 2 Score: 62.3882 bits (150), Expect = 7.507e-69
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGVKFGEAVWFKAG+QIF EGGLDYLG P
Sbjct:  119 KNGVKFGEAVWFKAGSQIFQEGGLDYLGNP 148
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.165e-68
Identity = 104/120 (86.67%), Postives = 112/120 (93.33%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSK
Sbjct:    1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSK 119

HSP 2 Score: 63.929 bits (154), Expect = 2.165e-68
Identity = 44/87 (50.57%), Postives = 48/87 (55.17%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKPQPHFMLRTFLGNLGLAKFVP*WVLFERIQ--NCGRSFLVEELDPTFSPGWVLLDPLG 665
            KNGV+FGEAVWFKAGAQIFSEGGLDYLG P              LA +    VL   I+    G   L E LDP +  G    DPLG
Sbjct:  119 KNGVQFGEAVWFKAGAQIFSEGGLDYLGNP------NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGG--AFDPLG 197
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.165e-68
Identity = 102/120 (85.00%), Postives = 107/120 (89.17%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MATSAIQQSAF G+T LRQ NEF+RK G     R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L K
Sbjct:    1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEK 120

HSP 2 Score: 65.4698 bits (158), Expect = 2.165e-68
Identity = 57/136 (41.91%), Postives = 70/136 (51.47%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP---QPHFMLRTFLGNLGLAKFVP*WVLFERIQNCGRSFLVEELDPTFSPGWVLLDPLGFGLRTPKSNCLNLKGQGTPKNGAVRGIVLPRFGNSFYPRLIVPMGQGP 809
            KNGVKFGEAVWFKAG+QIF+EGGLDYLG P       +L  +   + L  FV  +         G   L E LDP +  G    DPL  GL     +   LK +   KNG  R  +   FG  F+ + IV  G+GP
Sbjct:  120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGY-------RVGGGPLGEGLDPLYPGG--AFDPL--GLADDPDSFAELKVKEL-KNG--RLAMFSMFG--FFVQAIV-TGKGP 238
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.784e-64
Identity = 101/122 (82.79%), Postives = 108/122 (88.52%), Query Frame = 2 
Query:   53 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MAT SAIQ S+ AGQT LR Q NE V+KVG A   RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+K
Sbjct:    1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAK 121

HSP 2 Score: 65.0846 bits (157), Expect = 6.784e-64
Identity = 59/135 (43.70%), Postives = 67/135 (49.63%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKPQPHFMLRTFLGNLGLAKFVP*WVLFERIQ--NCGRSFLVEELDPTFSPGWVLLDPLGFGLRTPKSNCLNLKGQGTPKNGAVRGIVLPRFGNSFYPRLIVPMGQGP 809
            KNG+KFGEAVWFKAGAQIFSEGGLDY G P              LA +    VL   I+    G   L E LDP    G    DPL  GL      C  LK +   KNG  R  +   FG  F+ + IV  G+GP
Sbjct:  121 KNGLKFGEAVWFKAGAQIFSEGGLDYAGNP------NLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGG--AFDPL--GLADDPEACAELKVKEI-KNG--RLAMFSMFG--FFVQAIV-TGKGP 239
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.785e-64
Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MA SA+ Q+     TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSK
Sbjct:    1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSK 118

HSP 2 Score: 65.0846 bits (157), Expect = 6.785e-64
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGVKFGEAVWFKAGAQIFSEGGLDYLG P
Sbjct:  118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.785e-64
Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            MA SA+ Q+     TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSK
Sbjct:    1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSK 118

HSP 2 Score: 65.0846 bits (157), Expect = 6.785e-64
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGVKFGEAVWFKAGAQIFSEGGLDYLG P
Sbjct:  118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 5.629e-59
Identity = 122/182 (67.03%), Postives = 131/182 (71.98%), Query Frame = 2 
Query:   53 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKE--------WSEIRRSSLVQGWRSNIL*RWP*LSWQTPTSFHAQNIFGQSGPCQVCALMGFV 574
            MATSAIQQSAFAGQTAL+QSNE V K+G   GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSK         W +       +G    +           P   HAQ+I      CQV  LMGFV
Sbjct:    1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL---------GNPNLIHAQSILA-IWACQV-VLMGFV 171
[Close]
BLAST of EY684107 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.010e-58
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 2 
Query:  143 DGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK 412
            +GGR+TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSK
Sbjct:    3 EGGRVTMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 92

HSP 2 Score: 61.6178 bits (148), Expect = 3.010e-58
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 
Query:  411 KNGVKFGEAVWFKAGAQIFSEGGLDYLGKP 500
            KNGV FGEAVWFKAG+QIFSEGGLDYLG P
Sbjct:   92 KNGVTFGEAVWFKAGSQIFSEGGLDYLGNP 121
The following BLAST results are available for this feature:
BLAST of EY684107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CB23_TOBAC1.070e-7089.17Chlorophyll a-b binding protein 36, chloroplastic ... [more]
CB26_PETSP4.034e-7090.00Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB21_SILPR7.507e-6986.67Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB21_LEMGI2.165e-6886.67Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB215_PEA2.165e-6885.00Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB21_PINTH6.784e-6482.79Chlorophyll a-b binding protein type I, chloroplas... [more]
CB23_ORYSJ6.785e-6484.17Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI6.785e-6484.17Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_GOSHI5.629e-5967.03Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB25_SOLLC3.010e-5894.44Chlorophyll a-b binding protein 5, chloroplastic (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-B08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684107 ID=EY684107; Name=EY684107; organism=Citrus sinensis; type=EST; length=1078bp
CCCACGCGATCCGGCTTCAGCAACAAAAGGAAAAGCTTTCGCATAAGAAC
ATATGGCAACCTCTGCTATCCAACAATCAGCATTTGCTGGCCAGACCGCC
TTGAGGCAATCCAATGAGTTTGTCCGCAAGGTTGGAGTTGCTGACGGTGG
CCGTATCACCATGAGGAGGACTGTCAAATCCGCTCCCCAGAGCATCTGGT
ACGGCCCAGACCGCCCAAAGTACTTGGGACCATTCTCTGAGCAAACACCA
TCATACTTGACTGGTGAGTTCCCTGGTGACTATGGCTGGGATACCGCTGG
TTTATCAGCAGACCCCGAGACATTTGCTAAGAACCGTGAGCTAGAGGTGA
TCCACAGCAGATGGGCAATGCTTGGAGCTCTTGGCTGCGTCTTCCCTGAA
ATCCTCTCCAAAGAATGGAGTGAAATTCGGCGAAGCAGTTTGGTTCAAGG
CTGGCGCTCAAATATTCTCTGAAGGTGGCCTTGACTATCTTGGCAAACCC
CAACCTCATTTCATGCTCAGAACATTTTTGGGCAATCTGGGCCTTGCCAA
GTTTGTGCCTTAATGGGTTTTGTTTGAAAGGATACAGAATTGTGGGCGGT
CCTTCTTGGTGGAAGAACTTGACCCCACTTTTTCCCCTGGTTGGGTGCTT
TTGGACCCACTTGGGTTTGGGTTGAGGACCCCCAAATCAAATTGCTTAAA
TTTAAAAGGTCAAGGAACCCCAAAAAATGGGGCCGTCCGGGGCATTGTAC
TCCCCAGGTTTGGGAATTCTTTTTATCCACGGCTTATAGTCCCCATGGGG
CAAGGTCCTCCATTTTGAGAAACCCTCATATAAAACCCCATTTGCCATAA
TCCTCGGGGGGGCACAACCAGATGGCCCGGGGAGCTATATATGCACTCAA
ACCATTTTTGTATTCCCCAGGGGATAAATGTAAAAAGAAACCACTTGCGG
CAGTATGGTGTGGGGGGGGGTCTTATTTTTTCATCACACCTGTGATAGAA
AATTCATTATTTACTCATTCTTCATTTTATCTAAGAATGGTGGTGGATGT
GATTTTATTGTGGAGTGGGNGAATGACA
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