EY684100

Overview
NameEY684100
Unique NameEY684100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length952
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 9.177e-47
Identity = 95/131 (72.52%), Postives = 104/131 (79.39%), Query Frame = 1
Query:   25 PSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL*KNXXXXXXXXXXXXXXXXXXPKIKAKSKMSKADNEARKIQKMLAFQAAKQKSKGSKNAKRW 417
            PSTLLVLDEPTNHLDIPSKEMLEEAI+ YKGTVITVSHDRYF+KQIVNRV+EV+D  L DYAGDYNY+L KN                  PK+KAKSKMSKA+ EARK QKM AFQA+K+KSK SKNAKRW
Sbjct:  547 PSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYFLEKNVEARARELEREAELEEKAPKVKAKSKMSKAEREARKKQKMKAFQASKKKSKSSKNAKRW 677          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.015e-45
Identity = 94/131 (71.76%), Postives = 102/131 (77.86%), Query Frame = 1
Query:   25 PSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL*KNXXXXXXXXXXXXXXXXXXPKIKAKSKMSKADNEARKIQKMLAFQAAKQKSKGSKNAKRW 417
            PSTLLVLDEPTNHLDIPSKEMLEEAI+ Y+GTVI VSHDRYF+KQIVNRV+EV+D  L DYAGDYNYYL KN                  PK+KAKSKMSKA+ EARK QKM AFQ AKQKSK SKN+KRW
Sbjct:  561 PSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKNLDARTKELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQQAKQKSKASKNSKRW 691          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 37/67 (55.22%), Postives = 52/67 (77.61%), Query Frame = 1
Query:   28 STLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYY 228
            +  L+LDEPTNHLD+ SKE+LE A+  Y GT++ VSHDRYF+ +I  RV+E+  S++ +Y GDY+YY
Sbjct:  463 ANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYY 529          

HSP 2 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   34 LLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL 231
            LL+LDEPTNHLDI +   LE  +  Y G ++ VSHDRYF+ ++VN+V EV  +  + Y G+Y+ YL
Sbjct:  183 LLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYL 248          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: YFMR_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmR OS=Bacillus subtilis GN=yfmR PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   25 PSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL*K 237
            P+ LL+LDEPTNHLD  + E LE  +S Y G V+ V+HDRYF+ ++ NR+ E++  +L  Y G+Y  +L K
Sbjct:  176 PADLLILDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEK 246          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: YBIT_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli (strain K12) GN=ybiT PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:    4 FGNSWYPPSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL 231
            FG        +L++DEPTNHLD+ S E L  A+  Y+GT+I VSHDR FV  +  R++E+    + D++G+Y  YL
Sbjct:  449 FGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: YBIT_ECOL6 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O6 GN=ybiT PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:    4 FGNSWYPPSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL 231
            FG        +L++DEPTNHLD+ S E L  A+  Y+GT+I VSHDR FV  +  R++E+    + D++G+Y  YL
Sbjct:  449 FGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: YBIT_ECO57 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:    4 FGNSWYPPSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYYL 231
            FG        +L++DEPTNHLD+ S E L  A+  Y+GT+I VSHDR FV  +  R++E+    + D++G+Y  YL
Sbjct:  449 FGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: Y658_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI0658 OS=Haemophilus influenzae GN=HI0658 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.635e-11
Identity = 30/68 (44.12%), Postives = 48/68 (70.59%), Query Frame = 1
Query:   25 PSTLLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGDYNYY 228
            PS LL+LDEPTNHLD+ +   LE  +  Y+GT++ +SHDR F+  IV +++ +++  L +Y GDY+ +
Sbjct:  167 PSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSF 234          
BLAST of EY684100 vs. ExPASy Swiss-Prot
Match: EXPZ_BACSU (Nucleotide-binding protein expZ OS=Bacillus subtilis GN=expZ PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.135e-11
Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   34 LLVLDEPTNHLDIPSKEMLEEAIS*YKGTVITVSHDRYFVKQIVNRVVEVKDSNLRDYAGD 216
            +L+LDEPTNHLD+PS+E LEE +S Y GT++ VSHDRYF+++  N  + + ++ +     D
Sbjct:  427 VLILDEPTNHLDLPSREQLEETLSQYSGTLLAVSHDRYFLEKTTNSKLVISNNGIEKQLND 487          
The following BLAST results are available for this feature:
BLAST of EY684100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AB2F_ARATH9.177e-4772.52ABC transporter F family member 2 OS=Arabidopsis t... [more]
AB5F_ARATH1.015e-4571.76ABC transporter F family member 5 OS=Arabidopsis t... [more]
YDIF_BACSU1.293e-1655.22Uncharacterized ABC transporter ATP-binding protei... [more]
YFMR_BACSU1.931e-1247.89Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECOLI4.303e-1243.42Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECOL64.303e-1243.42Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECO574.303e-1243.42Uncharacterized ABC transporter ATP-binding protei... [more]
Y658_HAEIN1.635e-1144.12Uncharacterized ABC transporter ATP-binding protei... [more]
EXPZ_BACSU2.135e-1147.54Nucleotide-binding protein expZ OS=Bacillus subtil... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-B01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684100 ID=EY684100; Name=EY684100; organism=Citrus sinensis; type=EST; length=952bp
CATTTTGGCAATTCATGGTACCCCCCATCAACTCTTCTAGTTTTGGATGA
ACCAACTAATCACTTGGATATTCCTTCAAAAGAGATGCTCGAGGAGGCCA
TATCATAGTACAAGGGCACAGTAATCACAGTTTCTCATGACCGATACTTC
GTAAAGCAAATAGTTAATAGAGTAGTGGAGGTTAAAGACAGCAATTTACG
GGACTATGCTGGCGATTACAATTATTACCTATAGAAAAACCTCGATGCTC
GGGAAAAGGAGCTTGAACGTGAGGCAGAGCTCGAAGAAAGGGCTCCAAAA
ATCAAGGCCAAATCCAAGATGTCAAAGGCTGATAACGAAGCTCGGAAGAT
ACAGAAAATGCTGGCCTTCCAGGCAGCGAAACAAAAATCAAAAGGCTCTA
AGAATGCTAAAAGATGGGAATGAGAGAATTACCCAAAATATTATGCGGAA
AATAATCCATTGTAACCTAATTATGCTGAGCATAATTCCGGATGCAGTAT
GGGGCTATGTTGAGGCTGCAAATAAGGGGTACAGCTGTATATAAATATAT
AGGAAACCTGATAGGAATTCAGGACCAGAAGTGGAACAACTCTTCGCACA
AATTTAGTGATTTTTTACCTTCCTGGAAAATCCGCCCCACCAACGCTCAA
ACACCCACAGTTTTCGCCAACTTCGTTATGATATACAAATTTTAAGGCTA
TTTATAATCAACTTTTTCCAAATTAAATGCAATGTTCGAAGTGGTAATTT
GTAGTAGACACATTAGCATTGACGACATAAACGATAAATAATTCCTCATA
TACTGCGTAGTTGTGAAACCTAAACATCTTAGAACGCCACATATGAGCGA
GGGACATAATTTAAATGAAAAGGTGAAGGAAAAAAAAAAAAAAATAAAAT
AAGAAAAAAAAGATAAAAGAGGGATTGGAAAAGATGACGAGTGAAAACTA
AA
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