EY684096 | Citrus Genome Database

Overview


Name	EY684096
Unique Name	EY684096
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	996

Libraries


Library Name	Type
Sweet orange leaf, young greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.589e-65
Identity = 143/241 (59.34%), Postives = 153/241 (63.49%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNL 733
            KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDVIHPLKVSLEDLYNGTSKKLSLSRNVI                    QGSGMKVSIRHLGPSMIQQMQHPCNECKGTG+TINDKDRC QCKG            ++V+KGMQ  Q             TV G+   FVL +K+HPK   ++GD+L
Sbjct:   34 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCSQCKG-EKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGD-IVFVLQQKEHPKF-KRKGDDL 270

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.364e-64
Identity = 137/243 (56.38%), Postives = 153/243 (62.96%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNLIF 739
            KAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLEDL+ GT+KKLSLSRNVI                    QG+GMKVSIRHLGPSMIQQMQHPCNECKGTG+TINDKDRCPQCKG            ++V+KGMQ  Q             TV G+   FVL +K+HPK   ++G++L +
Sbjct:   35 KAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKG-EKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGD-IVFVLQQKEHPKF-KRKGEDLFY 274

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 7.484e-63
Identity = 136/243 (55.97%), Postives = 150/243 (61.73%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNLIF 739
            KAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLE+LYNGTSKKLSLSRNVI                    QGSGMKVSIR LGP MIQQMQHPCN+CKGTG+ INDKDRCP CKG            + V+KGMQ  Q             TV G+   FVL +K+HPK   ++GD+L +
Sbjct:   14 KAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGTGEMINDKDRCPLCKG-EKVVQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGD-IVFVLQQKEHPKF-QRKGDDLFY 253

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.667e-62
Identity = 133/240 (55.42%), Postives = 147/240 (61.25%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNL 733
            KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                       EDV+HPLKVSLED+Y GT KKLSLSRN +                    QGSGMKVSIR LGP MIQQMQH CNECKGTG+TIND+DRCPQCKG            + V+KGMQ  Q             TV G+   FVL +K+HPK   ++G++L
Sbjct:   36 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETINDRDRCPQCKG-DKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGD-IVFVLQQKEHPKF-KRKGEDL 272

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.844e-62
Identity = 133/243 (54.73%), Postives = 149/243 (61.32%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNLIF 739
            KAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKE        HDPFDI                        EDV+HPLKVSLEDLYNGTSKKLSLSRNV+                    QGSGMKVSIR LGP MIQQMQHPCNECKGTG+ I+DKDRCPQCKG            + V+KGMQ  Q             TV G+   FVL +K+HPK   ++GD+L +
Sbjct:   35 KAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPCNECKGTGEMISDKDRCPQCKG-EKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGD-IVFVLQQKEHPKF-KRKGDDLFY 274

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 8.563e-59
Identity = 126/241 (52.28%), Postives = 147/241 (61.00%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKGXXXXXXXXXXXXLLVKKGMQMDQXXXXXXXXXXXXXTVQGEHWNFVLNKKKHPKI*PKRGDNL 733
            KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLED+Y GT+KKLSLSR  +                    QGSGMK+SIR  GP M+QQ+QH CN+CKGTG+TIND+DRCPQCKG            + V+KGMQ +Q             TV G+   FV+ +K+HPK   ++G++L
Sbjct:   36 KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHACNDCKGTGETINDRDRCPQCKG-EKVVSEKKVLEVNVEKGMQHNQKITFSGQADEAPDTVTGD-IVFVIQQKEHPKF-KRKGEDL 273

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.656e-35
Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKG 544
            K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G G+ IN+KDRC +C+G
Sbjct:   30 KLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEG 207

HSP 2 Score: 28.8758 bits (63), Expect = 1.656e-35
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1

Query:  547 KKVISEKKVLEVIGEKGNANGPKIT 621
            KKVI E K+LEV  +KG  +G +IT
Sbjct:  208 KKVIKEVKILEVHVDKGMKHGQRIT 232

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.656e-35
Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKG 544
            K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G G+ IN+KDRC +C+G
Sbjct:   30 KLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEG 207

HSP 2 Score: 28.8758 bits (63), Expect = 1.656e-35
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1

Query:  547 KKVISEKKVLEVIGEKGNANGPKIT 621
            KKVI E K+LEV  +KG  +G +IT
Sbjct:  208 KKVIKEVKILEVHVDKGMKHGQRIT 232

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.656e-35
Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKG 544
            K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G G+ IN+KDRC +C+G
Sbjct:   30 KLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEG 207

HSP 2 Score: 28.8758 bits (63), Expect = 1.656e-35
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1

Query:  547 KKVISEKKVLEVIGEKGNANGPKIT 621
            KKVI E K+LEV  +KG  +G +IT
Sbjct:  208 KKVIKEVKILEVHVDKGMKHGQRIT 232

[Close]

BLAST of EY684096 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.656e-35
Identity = 74/178 (41.57%), Postives = 99/178 (55.62%), Query Frame = 2

Query:   14 KAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGKTINDKDRCPQCKG 544
            K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G G+ IN+KDRC +C+G
Sbjct:   30 KLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEG 207

HSP 2 Score: 28.8758 bits (63), Expect = 1.656e-35
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1

Query:  547 KKVISEKKVLEVIGEKGNANGPKIT 621
            KKVI E K+LEV  +KG  +G +IT
Sbjct:  208 KKVIKEVKILEVHVDKGMKHGQRIT 232

The following BLAST results are available for this feature:

BLAST of EY684096 vs. ExPASy Swiss-Prot

BLAST of EY684096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
DNJH_CUCSA	3.589e-65	59.34	DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P...	[more]
DNJH_ATRNU	1.364e-64	56.38	DnaJ protein homolog ANJ1 OS=Atriplex nummularia P...	[more]
DNJH1_ALLPO	7.484e-63	55.97	DnaJ protein homolog 1 (Fragment) OS=Allium porrum...	[more]
DNAJ3_ARATH	1.667e-62	55.42	Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G...	[more]
DNJH2_ALLPO	2.844e-62	54.73	DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE...	[more]
DNAJ2_ARATH	8.563e-59	52.28	Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G...	[more]
DNJA2_RAT	1.656e-35	41.57	DnaJ homolog subfamily A member 2 OS=Rattus norveg...	[more]
DNJA2_MOUSE	1.656e-35	41.57	DnaJ homolog subfamily A member 2 OS=Mus musculus ...	[more]
DNJA2_HUMAN	1.656e-35	41.57	DnaJ homolog subfamily A member 2 OS=Homo sapiens ...	[more]
DNJA2_BOVIN	1.656e-35	41.57	DnaJ homolog subfamily A member 2 OS=Bos taurus GN...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-650-053-A09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY684096 ID=EY684096; Name=EY684096; organism=Citrus sinensis; type=EST; length=996bp
CCACGCGTCCGGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTG
ATCCTGAGAAGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGAC
CCAGAGAAGCGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGA
GGGAATGGGTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAAT
CCTTCTTCGGTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGG
CAAAGGAGGGGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGA
TCTGTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCT
GCACCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGT
TCTGGCTGCCAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCC
CTCTATGATTCAACAAATGCAGCATCCTTGCAATGAATGCAAGGGTACTG
GAAAAACAATCAATGACAAGGATCGCTGCCCACAATGTAAGGGTTGAAGA
AGGTCATTTCGGAGAAAAAAGTCTTGGAGGTTATTGGTGAAAAAGGGAAT
GCAAATGGACCAAAAATTACTATCCCTGAAAAACCTGAAAAAACCACCCA
ACACTGTCCAAGGTGAACATTGGAATTTTGTTCTCAACAAAAAAAAGCAC
CCCAAAATTTAACCCAAAAGGGGGGATAACCTTATTTTTTGAACCACACC
CCGGCCATGGACAAAAATCCCCCTGGGTGCTATCCTTATTATAAAAAATT
CATTTTGAAAAGACCGTGAACCCCACCCCATTAATAATCCCCGCCCCGGG
GGAAAAATACTCACACCCCAGAACATACTTTCAAGGGTCAATCAGAAGAG
AAGTGAAGGGGAAAACGACCCTAAGTTGACCCCAAATGGCGGTCCCTATT
ATTGACGAGGGGGCGGCAAACAAAAGGTGTGTGAAATTTAATTTCT