EY684093

Overview
NameEY684093
Unique NameEY684093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684093 vs. ExPASy Swiss-Prot
Match: WIT1_ARATH (WPP domain-interacting tail-anchored protein 1 OS=Arabidopsis thaliana GN=WIT1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.862e-24
Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = 2 
Query:   83 MDTDADQGTSASVVVNVGDS---ETESNKVYSLEGISANGDVIE-ELRSAGEVFSQLELHIACSSEKLVNLNILTMHVATRESEFEAFAKKREHIL---------DDDSVETALAFDLLSGLLDSELRELENFITTVEADFVKARELISSYRELGES-IHRNGKKSY*IPEDSLQPSRDQIL*IKKHSGKFPKNFSALDRKGN 649
            M+T+ +   + SV  N  DS   E  S K    E +S  G V+  +L SAGEV +++EL  A  SEKLVNL++LTM + TRE++FE+F  K+E            DDDS E AL FDLLS +L+SE++ELE+ +  ++ +   AR +IS ++  GE+ +   GK +    E SL    +Q++ +KK S  F +  S LD +G+
Sbjct:    1 METETEHDRTVSVDDN--DSLVPEPSSTKESFFEDLSLTGQVMNPQLSSAGEVLTKVELDFAFVSEKLVNLSLLTMQLGTRENDFESFVSKKEEDEEEPSSNVDDDDDSAEKALEFDLLSSILNSEVKELESLLGFLQNEIQSARVMISPFQHDGEAFLDLEGKLN--DTEQSLGQLMEQVVEMKKQSSNFQRLSSGLDEQGS 199
The following BLAST results are available for this feature:
BLAST of EY684093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WIT1_ARATH1.862e-2438.92WPP domain-interacting tail-anchored protein 1 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-053-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684093 ID=EY684093; Name=EY684093; organism=Citrus sinensis; type=EST; length=1022bp
CCACGCGTCCGAAGATTTTCTTGAGAAAACAGGAAATGATGCGGGCTGGT
TCTGAGGCCAGTATAACGAGAGGACTACTGAAATGGATACTGATGCTGAT
CAGGGAACTAGCGCTTCTGTTGTTGTTAATGTTGGTGATTCAGAGACAGA
ATCGAATAAAGTTTACTCACTTGAAGGCATTTCGGCTAATGGGGATGTGA
TTGAAGAGCTAAGAAGTGCCGGCGAGGTTTTCAGTCAATTGGAATTACAC
ATAGCATGTTCTTCAGAGAAGTTAGTTAACTTAAATATTCTTACGATGCA
TGTAGCAACCAGGGAAAGTGAATTTGAAGCCTTTGCTAAAAAGAGAGAGC
ATATCTTGGATGATGATTCTGTAGAGACAGCTCTGGCATTTGATCTCTTG
TCTGGATTATTGGATTCAGAGTTGAGAGAACTGGAAAATTTCATAACTAC
TGTTGAAGCTGATTTTGTTAAAGCTCGTGAGCTGATATCTTCTTATAGAG
AGTTGGGGGAAAGCATCCATAGAAATGGGAAAAAAAGTTACTAGATTCCT
GAAGATTCATTGCAGCCGTCACGGGATCAAATCTTATAAATTAAAAAGCA
TTCTGGTAAGTTCCCAAAGAACTTTTCAGCTCTAGATAGAAAAGGAAATT
GTAACCTACCTACTGAACTAAGTATGCTTTGTTCTATTCTTTTTTTTTTG
AGCATAATTTGGTGCTTGGAAAACTTTAAAAAAAACCTTGGCTTCCCCGA
AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAGGGGGGCCCCCTT
TAAAGAGAACCAGCTTTAACTTACCCCGGGATGGGAAATCCTTAATCTCT
TTTCTAAAGGGTCCCCCAAAAATTTATAATTTCCAGGGGGGCCCGCTTTT
TTTTTACGAGTCCCGGGGAAAGGGGGGAAAAAACCCCGGGGGGGGTTTTA
CCCCCCACACATTAAAAAACCCCCCCCTGTGGGCCGACAACACAACCCCC
CCCCCCCTTGTTTTTCCGCCCG
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