EY684083

Overview
NameEY684083
Unique NameEY684083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 5.354e-92
Identity = 159/186 (85.48%), Postives = 177/186 (95.16%), Query Frame = 2
Query:    2 YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKALG 559
            +DLYQ+TRLEKFVTAYG+FLKANGE PVTW+RASSMDEVLREADVISLHPVLDKTT+HL+NKE L  MKK+AIL+NCSRGPVIDE ALV+HL+ NPMFRVGLDVFEDEPYMKPGL++MKNAI+VPHIASASKWTREGMATLAALNVLGKIKGYP+W +PN+VEPFL+EN  PPAASPSIVN+KALG
Sbjct:  195 FDLYQSTRLEKFVTAYGEFLKANGEAPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAILINCSRGPVIDEAALVDHLRDNPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNVLGKIKGYPVWSDPNRVEPFLDENVSPPAASPSIVNAKALG 380          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.064e-23
Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = 2
Query:  110 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            + +L+E+D ISLH  L K TYH+I ++ L  MK  AIL+N SRG V+D  AL++ LK+  +   GLDVFE+EPY    L ++KN ++ PHI SA+   REGMA L A N++   KG
Sbjct:  199 ETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAFAKG 314          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.390e-23
Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            ++++LRE+D + L   L + TYHLIN+ERL  MKK AIL+N +RG V+D  ALV+ LK+  +   GLDVFE+EPY    L ++ N ++ PHI SAS   REGMA L A N++   +G
Sbjct:  198 LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRG 314          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.390e-23
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            +DE+LRE+D + L   L+K TYH+IN+ERL  MK+ AIL+N +RG VID  AL++ LK+  +   GLDV+E+EPY    L  + N ++ PHI SA+   REGMA L A N++   +G
Sbjct:  199 LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.010e-23
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  101 SSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPG--LSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            + +D +L ++D++S+H  L K TYHLIN+ERL  MKK A L+N +RGPV+D  ALV+ LK+  +    LDVFE EP + P   L++  N ++ PHIASA+   R+ MA LAA N++  +KG
Sbjct:  196 TDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEP-LPPNHPLTKFDNVVLAPHIASATIEARQRMAELAARNLIAVLKG 315          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.537e-22
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 442
            +DE+L+E+D + L   L K TYH+IN+ERL  MK  AILVN +RG V+D  ALV+ L++  +   GLDVFE+EPY    L  + N ++ PHI SA+   REGMA L A N++
Sbjct:  198 LDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNLI 309          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.424e-22
Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  104 SMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 442
            S++++LRE+D + L   L K T ++IN+ERL  MKK AILVN +RG V+D  AL++ LK+  +   GLDV+E+EPY    L  +KN ++ PHI SA+   REGMA L A N++
Sbjct:  197 SLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLI 309          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.219e-21
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 442
            ++E+L+E+D + L   L K TYH+I +  L  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  +KN I+ PHI SA+   REGMA L A N++
Sbjct:  198 LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNLI 309          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            ++EVL+E+D + L   L K T ++IN+ERL  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  + N ++ PHI SA+   RE MA L A N++   +G
Sbjct:  198 LEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIAFKRG 314          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
The following BLAST results are available for this feature:
BLAST of EY684083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
DHGY_CUCSA5.354e-9285.48Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_THELI1.064e-2348.28Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRHO1.390e-2348.72Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRAB1.390e-2347.86Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEPD9.010e-2347.11Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THEON1.537e-2249.11Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRKO3.424e-2247.79Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEGJ2.219e-2147.32Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRFU1.439e-2045.30Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GHRB_YERPS4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-H06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684083 ID=EY684083; Name=EY684083; organism=Citrus sinensis; type=EST; length=939bp
CTATGATCTTTACCAAGCTACACGCTTGGAAAAGTTTGTCACAGCTTATG
GTCAGTTTCTAAAAGCCAATGGTGAACAACCTGTCACTTGGAAAAGAGCC
TCGTCCATGGATGAGGTGCTTCGAGAAGCAGATGTGATAAGTCTTCATCC
AGTCTTGGATAAAACCACTTACCATTTGATCAACAAAGAAAGGCTTGCAA
CGATGAAGAAGGAAGCGATTCTTGTCAACTGCAGTAGGGGTCCCGTGATT
GATGAAGTAGCTCTGGTGGAGCATTTGAAACAAAATCCAATGTTTCGTGT
CGGTCTTGATGTCTTTGAGGATGAGCCTTACATGAAGCCTGGACTCTCTG
AAATGAAGAACGCCATCGTGGTACCTCACATTGCTTCCGCGTCCAAGTGG
ACTCGTGAAGGAATGGCAACCCTTGCTGCTCTGAATGTCCTGGGAAAGAT
CAAAGGATACCCCATATGGGGTAACCCAAATCAAGTAGAACCATTCTTGA
ACGAGAATGCTCAGCCTCCTGCTGCAAGTCCAAGCATTGTGAACTCAAAG
GCATTGGGTTTGCCGGTTTCAAGGCTTTAGGCTCTCAGCAGCTTCACCAC
CTCGGGGGCCTAATGGTGTGCATTAAAAACACCCTTACTAAGTTTGAAAG
GTATTTTTGATGTGAGTGGTCAAAATTTTTCTTTATTGAGAAACTTTAAC
AACCCTGGTACCTACTGGCTTTCGCGCCTTTGTGGTGAATTGACTGGCTT
TATTATTTTTCCATTTTTTCGGTGCATCTTAAAAAAAAAAAAAAAAGGGG
GGCCCGCCTCAAAGGGGACCCAAACTTATCACAGCCCGGGCAGGCCAGGT
TCTAATCTTTTTATTAAATGGCCACCCTAAACATCTCTTTTTTTGGGCCC
TGACTTTTTTCTAAAATGCGGGCAAGGAGAAAAAAACAC
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