EY684077

Overview
NameEY684077
Unique NameEY684077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.821e-94
Identity = 180/235 (76.60%), Postives = 192/235 (81.70%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYEEIVKEVSSYLKKVGYNPDKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 343.199 bits (879), Expect = 1.021e-93
Identity = 180/235 (76.60%), Postives = 192/235 (81.70%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.334e-93
Identity = 180/235 (76.60%), Postives = 192/235 (81.70%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET+KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L+D LDNI E K+   KP
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKGRYEEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.070e-93
Identity = 179/235 (76.17%), Postives = 191/235 (81.28%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.621e-93
Identity = 179/235 (76.17%), Postives = 191/235 (81.28%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 8.647e-93
Identity = 178/235 (75.74%), Postives = 192/235 (81.70%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I ++K+   KP
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQINDAKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 340.117 bits (871), Expect = 8.647e-93
Identity = 178/235 (75.74%), Postives = 192/235 (81.70%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALL+FTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L+D LD I+E K+   KP
Sbjct:    1 MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALDQISEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.926e-92
Identity = 178/235 (75.74%), Postives = 191/235 (81.28%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP + P      F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.516e-92
Identity = 179/235 (76.17%), Postives = 191/235 (81.28%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP +        F G  +  E    L   +   L++ LD I E K+   KP
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEG-DNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKP 233
[Close]
BLAST of EY684077 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 9.561e-92
Identity = 177/235 (75.32%), Postives = 188/235 (80.00%), Query Frame = 2 
Query:   53 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATHPQVFQRLGTMKL*RRSLPYLKKGGYNPRESPIRAHLWFRG*THD*EVHPPLTGTRVHPLVDPLDNITESKKALKKP 757
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIID TTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAT P+ + +    ++ +    YLKK GYNP +        F G  +  E    L   +   L+D LD I E K+   KP
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDPTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK-YSKARYDEIVKEVSSYLKKVGYNPEKIAFVPISGFEG-DNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKP 233
The following BLAST results are available for this feature:
BLAST of EY684077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_WHEAT7.821e-9476.60Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_ORYSJ1.021e-9376.60Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_VICFA1.334e-9376.60Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_MANES5.070e-9376.17Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_ARATH6.621e-9376.17Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_TOBAC8.647e-9375.74Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_SOYBN8.647e-9375.74Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_SOLLC1.926e-9275.74Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A_MAIZE2.516e-9276.17Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A1_DAUCA9.561e-9275.32Elongation factor 1-alpha OS=Daucus carota PE=3 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-G11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684077 ID=EY684077; Name=EY684077; organism=Citrus sinensis; type=EST; length=811bp
GAGAACATTTTCGCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCC
TAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCATCGGCCATGTC
GACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACAAGCTTGGTGG
TATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGA
ACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAG
CGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCAC
CAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCA
AGAACATGATTACCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATT
GACTCTACCACTGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGAC
TCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTT
GCTGCTGTAACAAGATGGACGCCACCCACCCCCAAGTATTTCAAAGGCTA
GGTACGATGAAATTGTGAAGGAGGTCTCTTCCCTACCTGAAGAAGGGTGG
ATACAACCCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGT
GAACACATGATTGAGAGGTGCACCCACCTTTGACTGGAACAAGGGTCCAC
CCCCTGGTGGACCCTCTCGACAATATCACTGAATCCAAAAAGGCCCTAAA
AAAGCCCCCTTCGGACGCCACATCCAAAGATGGGATCCAAAATCGGCGGC
CAATGGAACCC
back to top