EY684075

Overview
NameEY684075
Unique NameEY684075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684075 vs. ExPASy Swiss-Prot
Match: EXEC1_ARATH (Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30
Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 2 
Query:  341 DWDWNRWTRHFSEIEQAESYASLLKFQLEDAIEREDFXXXXXXXXXXXXXXSKDTVAEIMAQLKNAIDEERYHDASRLCRYTGSGLVGWWVGYSKDSDDPFGRLIQIKPGVGRFVARNYSPRQLGSAFPGTPLFEIF 751
            DWDW+RW +HF +++  +   S+LK QL  AI+RED+              + D V ++M+    A+ EERY DA  L    G+GLVGWW G S+D  DPFG ++QI    GR+VAR+Y+PRQL ++  G PLFEIF
Sbjct:  110 DWDWDRWKKHFDQVDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYKDAVYLRDKAGAGLVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNPRQLSTSAAGAPLFEIF 246
The following BLAST results are available for this feature:
BLAST of EY684075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXEC1_ARATH3.307e-3045.26Protein EXECUTER 1, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-G09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684075 ID=EY684075; Name=EY684075; organism=Citrus sinensis; type=EST; length=915bp
TCTAATCTGCATATTCCCATTCCCCGGAAAAGCAAAGAGAGTTTAAGAGA
GTAGATAGAGGGAGATGATAATAACAAATAATGGATGGGGCATAACGCCA
GCGACTCAAACTCAACTGAGGAGGAGGCCGCCGCCGCCCCGCTTTCAGTG
TCTGGATTTGTCCGTCAAGAAATCATCCACTCCCACCAGTAGTTTGAGCT
TCGTATTGGGTTGTTACAGTTTCCCGTCTTCTTCCAAATACAAGAAAGTC
AAGCACCCGCTTCCACAACCCTTGTGTTGTCTTTGTAGCGACAATACTCA
CAGTACCAATACTAACAACACCATTTCTTCTTCTTCTTTGGATTGGGATT
GGAATCGATGGACTCGCCACTTCTCTGAAATCGAACAAGCTGAGAGCTAC
GCCTCTCTTCTCAAGTTTCAACTGGAAGATGCTATTGAGAGGGAAGACTT
TGAAGAAGCCGCTAACTTGAAAAACGCCATTGCAGAAGCTGCTTCTAAGG
ATACTGTGGCAGAAATAATGGCTCAGCTGAAGAATGCGATTGATGAAGAG
CGATATCATGATGCTTCAAGGTTGTGTAGATACACAGGAAGTGGACTGGT
TGGCTGGTGGGTGGGCTACTCTAAGGACTCTGATGATCCCTTTGGCAGAC
TAATACAAATAAAACCTGGCGTTGGCAGATTTGTTGCCCGGAACTACAGC
CCAAGACAGTTGGGGTCTGCATTTCCAGGAACTCCACTATTTGAAATTTT
TCGGGGCAAAGAATATGGAGGAATCATACCTCATGGCAGGTAAAAAATTT
GGAAGCAAGCCCAGGGGAATTTAAACAAATTCTACAAGTTCCCCCTTCAA
AATCCCCTTAAAAATCCCTCCCCCTTTCCCAAAATTTGAAAAAGGGCTTC
CCTTAATTAAATATG
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