EY684061

Overview
NameEY684061
Unique NameEY684061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD11_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.795e-29
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:  305 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            S PR RLE LL+QPGN++CADCGSP+PKWVSLS GVFICIKCSG+HRSLGVHISK
Sbjct:   44 SDPRDRLEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISK 98          

HSP 2 Score: 45.0542 bits (105), Expect = 2.795e-29
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 1
Query:  454 SAYIKVKLDEWTNEQVDALAEMGGNIAVKQEI*SLHSWQSSRNQVQIRL*TSAPNFIRKKYKKLKF 651
            S  + VKLDEWT++QVD L   GGN AV +   + +  QS + +          +FIRKKY++ +F
Sbjct:   97 SKVLSVKLDEWTDDQVDMLVGYGGNTAVNERFEACNIDQSKKPKPD-STNEERNDFIRKKYEQHQF 161          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD13_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.483e-19
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 2
Query:  305 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            SG R R+ +LL QP NR CADCG+ DPKW S + GVFIC+KC G+HRSLG HISK
Sbjct:   13 SGKR-RIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISK 66          

HSP 2 Score: 34.6538 bits (78), Expect = 1.483e-19
Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  454 SAYIKVKLDEWTNEQVDALAEMGGN 528
            S  + V LDEW++E+VD++ E+GGN
Sbjct:   65 SKVLSVTLDEWSDEEVDSMIEIGGN 89          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD12_ARATH (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.672e-19
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 2
Query:  305 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            SG R R+ +LL Q  NR CADCG+PDPKW S + GVFIC+KC G+HRSLG HISK
Sbjct:   13 SGKR-RIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISK 66          

HSP 2 Score: 34.6538 bits (78), Expect = 1.672e-19
Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  454 SAYIKVKLDEWTNEQVDALAEMGGN 528
            S  + V LDEW++E+VD++ E+GGN
Sbjct:   65 SKVLSVTLDEWSDEEVDSMIEIGGN 89          

HSP 3 Score: 20.7866 bits (42), Expect = 1.672e-19
Identity = 7/20 (35.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  579 KPSPNSFIDERSKFYQEKIQ 638
            KP P++  D+R +F + K +
Sbjct:  106 KPGPDASHDQRMRFIRSKYE 125          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.148e-15
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 2
Query:  323 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK*SLMN 484
            L  LLR+  N++CADC +  P+W S + GVFICI+C+GIHR+LGVHIS+   +N
Sbjct:   21 LSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVN 74          

HSP 2 Score: 30.8018 bits (68), Expect = 3.148e-15
Identity = 19/62 (30.65%), Postives = 30/62 (48.39%), Query Frame = 1
Query:  469 VKLDEWTNEQVDALAEMGGNIAVKQEI*SLHSWQSSRNQVQIRL*TSAPNFIRKKYKKLKFF 654
            V LD+WT EQ+  + +MG   A       L+      N  + +   +   FIR KY+K K++
Sbjct:   73 VNLDQWTAEQIQCMQDMGNTKAR-----LLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY 129          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.153e-15
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 2
Query:  323 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK*SLMN 484
            L  LLR+  N++CADC +  P+W S + GVFICI+C+GIHR+LGVHIS+   +N
Sbjct:   21 LSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVN 74          

HSP 2 Score: 30.8018 bits (68), Expect = 3.153e-15
Identity = 19/62 (30.65%), Postives = 30/62 (48.39%), Query Frame = 1
Query:  469 VKLDEWTNEQVDALAEMGGNIAVKQEI*SLHSWQSSRNQVQIRL*TSAPNFIRKKYKKLKFF 654
            V LD+WT EQ+  + +MG   A       L+      N  + +   +   FIR KY+K K++
Sbjct:   73 VNLDQWTPEQIQCMQDMGNTKAR-----LLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY 129          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD5_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS=Arabidopsis thaliana GN=AGD5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.514e-14
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 2
Query:  314 RARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            R  LE LL+ P NR CADC +  P+W S++ G+FIC++CSGIHRSLGVHISK
Sbjct:   16 RKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISK 67          

HSP 2 Score: 22.7126 bits (47), Expect = 1.514e-14
Identity = 17/59 (28.81%), Postives = 26/59 (44.07%), Query Frame = 1
Query:  475 LDEWTNEQVDALAEMGGNIAVKQEI*SLHSWQSSRNQVQIRL*TSAPNFIRKKYKKLKF 651
            LD W  EQV  +  MG + A          W++       R+     NFIR KY++ ++
Sbjct:   73 LDTWLPEQVAFIQSMGNDKANSY-------WEAELPPNYDRV--GIENFIRAKYEEKRW 122          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD15_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD15 OS=Arabidopsis thaliana GN=AGD15 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 2
Query:  323 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            LE LL+ P NR CADC S  P+W S++ G+FIC++CSGIHRSLGVHIS+
Sbjct:   19 LEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQ 67          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGE2_YEAST (ADP-ribosylation factor GTPase-activating protein effector protein 2 OS=Saccharomyces cerevisiae GN=AGE2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 35/50 (70.00%), Postives = 38/50 (76.00%), Query Frame = 2
Query:  323 LENLLRQPGNRHCADCGSP-DPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            L  LLR PGN HCADC +   P+W S S GVFICIKC+GIHRSLG HISK
Sbjct:   11 LSALLRDPGNSHCADCKAQLHPRWASWSLGVFICIKCAGIHRSLGTHISK 60          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: AGD1_ARATH (ADP-ribosylation factor GTPase-activating protein AGD1 OS=Arabidopsis thaliana GN=AGD1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.028e-13
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 2
Query:  323 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK 469
            ++ L R  GN  CADCG+P+P W SL+ GV ICI+CSGIHR+LGVHISK
Sbjct:  501 IDVLTRVLGNERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISK 549          
BLAST of EY684061 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.261e-13
Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 2
Query:  296 KNISGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISK*SLMNGQMNKLMLW-QKWAAILQ------*NKKYEAYTP 565
            K++   +A L NLL +  N+ CADC S  P+W S + GVFICI+C+GIHR+LGVHIS+   +N     L  W Q+    +Q       N+ YEAY P
Sbjct:    7 KDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVN-----LDQWTQEQIQCMQEMGNGKANRLYEAYLP 98          
The following BLAST results are available for this feature:
BLAST of EY684061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
AGD11_ARATH2.795e-2983.64Probable ADP-ribosylation factor GTPase-activating... [more]
AGD13_ARATH1.483e-1967.27Probable ADP-ribosylation factor GTPase-activating... [more]
AGD12_ARATH1.672e-1967.27ADP-ribosylation factor GTPase-activating protein ... [more]
SMAP1_HUMAN3.148e-1555.56Stromal membrane-associated protein 1 OS=Homo sapi... [more]
SMAP1_MOUSE3.153e-1555.56Stromal membrane-associated protein 1 OS=Mus muscu... [more]
AGD5_ARATH1.514e-1463.46Probable ADP-ribosylation factor GTPase-activating... [more]
AGD15_ARATH2.361e-1365.31Probable ADP-ribosylation factor GTPase-activating... [more]
AGE2_YEAST4.028e-1370.00ADP-ribosylation factor GTPase-activating protein ... [more]
AGD1_ARATH4.028e-1365.31ADP-ribosylation factor GTPase-activating protein ... [more]
SMAP2_MOUSE5.261e-1344.33Stromal membrane-associated protein 2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-F07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684061 ID=EY684061; Name=EY684061; organism=Citrus sinensis; type=EST; length=973bp
TTTGGATGTGCATTGTGCAGAGAAGAAGCTGATAGGGACCTTTTTTTTTT
AATTTTGAGAAGCAATTTTATATGTAGTTTTTTTTTACCCTTTATTGTTT
CTTCAATATGATGCTCTTAATTGATTGTTAATTGAATTTTAATTTTGATT
TCTTTTTTCTTTTCAGTTACCCATTTGTTTTTATACAAAGAAGGAGATGA
TAAATGGCTTTGCTGAGATTGTAGCGGCGTTCTGATGATTCTGGTCTTAT
ATTTGACAGCTGGAGATGGCAACCCAGCATGCAAATTCTGATCCCAAAAA
TATTTCTGGTCCACGAGCAAGGCTGGAGAATCTATTGAGGCAACCCGGTA
ATAGGCATTGTGCAGATTGTGGATCTCCTGATCCAAAATGGGTATCATTA
AGTACTGGAGTGTTTATTTGTATCAAGTGTTCTGGTATTCATAGAAGCCT
TGGAGTGCATATATCAAAGTGAAGCTTGATGAATGGACAAATGAACAAGT
TGATGCTTTGGCAGAAATGGGCGGCAATATTGCAGTAAAACAAGAAATAT
GAAGCTTACACTCCTGGCAATCTTCAAGAAACCAAGTCCAAATTCGTTTA
TAGACGAGCGCTCCAAATTTTATCAGGAAAAAATACAAAAAATTAAAATT
TTTTATTTTTGAATGAACAGGCGTTATTATGCCCATATCCGGGTTCCCCA
ATAAACGTACATCATCTCCCAACACTTAATTCCTTCAAGCCAAGAAAAAA
ACATTAACCAAAAACCAAACAAAAAAACCTCCTCTTGGACATCCCATTTC
CCATACCCCCTCAGAAACAACACGAACCCTCAAAACTTATAAACCCCACA
AAGCGCACCCCTCCATCGTAACCGCAATCGCTCAAACTCTTCCGTACTAT
TAACAACGTACACGCACACTCTCCCACTATTACTTACTAATCCTGTACAT
TCCGACCAGACTCTCCTAAATCT
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