EY684056

Overview
NameEY684056
Unique NameEY684056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684056 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.922e-37
Identity = 57/83 (68.67%), Postives = 73/83 (87.95%), Query Frame = 3
Query:   15 NYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 263
            +YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  377 SYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of EY684056 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.014e-36
Identity = 58/76 (76.32%), Postives = 69/76 (90.79%), Query Frame = 3
Query:   15 NYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 242
            NYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  369 NYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of EY684056 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.034e-32
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 3
Query:   18 YYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQGGSST 278
            Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G  S+
Sbjct:  259 YSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGGKKSS 345          
BLAST of EY684056 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.494e-27
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 3
Query:   21 YSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 239
            +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  390 FSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of EY684056 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.023e-20
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 3
Query:   18 YYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 242
            Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  398 YSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
The following BLAST results are available for this feature:
BLAST of EY684056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RD21A_ARATH6.922e-3768.67Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ2.014e-3676.32Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSPL_SOLLC1.034e-3264.37Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ6.494e-2764.38Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.023e-2048.10Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-F01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684056 ID=EY684056; Name=EY684056; organism=Citrus sinensis; type=EST; length=985bp
CCTGCTGTGTGTGAAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGC
TGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCT
TGAGGCTGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACT
ATCCCATCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAAC
CCATTGGGAGTGAGGGCATTACGACGCACCCCTGCTAAACCTTACTGGGC
TCATGGAAATCAAGGTGGAAGTAGCACTGCTTAATTATAGTTGGCACTGT
CAGAGCAGTGGAAGGCCGAAGGCAGGATGACACTACTTCGTGCTTGAGAA
AGGAGTACCCTCCACGGGCCTCAGCTCATTCGACTGCCGCGCGTTCCGAG
GGGCGGTGCCACCCGCCGCGCGGCCCCGCGCGACAACGGAGGGCGCACAC
GGCGAACAGGGCGGCCGGCACCCCACCAGCCGCCAGCAGCCCCAGCCCCC
GACGCCGCCCACCAAACACGCCGGGACCCGGGCGAAAGCCAGCCCCACAC
TAACGCCCCGCCCCCCCCACGACAGCTCGCCCGTCGCCGTCTCGTAATCC
CGCGGACCGAACCCTAAACCGAGAAGGAAAACGCTAAACCGACGCCCGAC
CCACGCACGCACCCGCCGCCCGCCCACCCCCCCCCCCCACCCTCCCCCCC
CCCCCCAGAACATCACGCCCCCCGAGGTCGGCCCCCGCCCTAGGGAGGAC
GCGAACGGAGCGCGGACCCGCGCACACCGGCGGGGAAATGACAAAGAACC
GAAACAGCAACCGAGACCAGGACAACGCAGGTCCCATAGGAAAAGCCCAC
CGACCCCCGCCAGGCCGCGCCCCCACGCCCAGGACGAGGACCCCGCGGAA
GGGCAAAGCCCGCGGCGGCCGCCCAACACGCCGCACGACGGCAANCCGGA
CATCGGAACCGCTGCGCACGCCCACGGCCTGGGCG
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