EY684052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_RAT (26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus GN=Psmd2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GSCN +V I+ +M++SE+EL + K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ Sbjct: 528 GSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSK 712
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_PONAB (26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii GN=PSMD2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GSCN +V I+ +M++SE+EL + K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ Sbjct: 528 GSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSK 712
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_MOUSE (26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus GN=Psmd2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GSCN +V I+ +M++SE+EL + K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ Sbjct: 528 GSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSK 712
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_HUMAN (26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GSCN +V I+ +M++SE+EL + K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ Sbjct: 528 GSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSK 712
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_BOVIN (26S proteasome non-ATPase regulatory subunit 2 OS=Bos taurus GN=PSMD2 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.722e-32 Identity = 75/185 (40.54%), Postives = 108/185 (58.38%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGE-----------------------AYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GSCN +V I+ +M++SE+EL + K E++EA + +E R + + + CAYAG+GNVLKVQ LL C++H + E A+QG AVLGIA++AM EE+G EMA+R+ HLL+YGE +RRAVPLAL L+ +SNP++N++DTLS+ Sbjct: 528 GSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSK 712
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: RPN1_SCHPO (26S proteasome regulatory subunit rpn1 OS=Schizosaccharomyces pombe GN=rpn1 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.509e-28 Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQH-----HEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 G+CN +VA I+ LM+R ES + KQ+ +AT E K KI + ++ + C+YAGTGNVL +Q LL C++ E Q A LG+A +AM E++G EM +R +H++ YGE +IR+A+PLALGLL SNP++ + DTLSR Sbjct: 527 GTCNGDVASTILQTLMEREESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSYAGTGNVLHIQKLLHICSEPPSDDAKESETTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLLSASNPQMRIFDTLSR 693
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: RPN1_NEUCR (26S proteasome regulatory subunit rpn-1 OS=Neurospora crassa GN=rpn-1 PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 7.488e-28 Identity = 73/169 (43.20%), Postives = 96/169 (56.80%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDR-SESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGP------AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 GS N EV++AI+ L+D S S L + +QE V+ E K + K + CA+AGTG VLK+Q LL C +H E GE +G AVLGI ++AM E++G EM +R HL+ YGE NIRRAVPLA+GL+ SNP++ V DTLSR Sbjct: 536 GSSNSEVSEAIVTTLLDEESGSRLNDKWSRFLALGLGLLYFGRQEQVDVILETLKAVEHPMAKPTAVLAEICAWAGTGAVLKIQELLHICNEHIEDGEEKKGEELLQAYAVLGIGLIAMGEDVGQEMVLRHFGHLMHYGEANIRRAVPLAMGLISPSNPQMKVYDTLSR 704
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: PSMD2_DICDI (26S proteasome non-ATPase regulatory subunit 2 OS=Dictyostelium discoideum GN=psmD2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.277e-27 Identity = 69/163 (42.33%), Postives = 96/163 (58.90%), Query Frame = 2 Query: 2 GSCNEEVAQAIIFALMDRSESELGEPXXXXXXXXXXXXXXXKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCAQHHEKGEAYQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRL 490 GSC+ E++ + L+ R + E KQ++ E E K K +Y +T+ +CAYAGTGNVLKVQN+L C+ E + G AVL IA++AM EELG +M +R +HLLQ G +I+RA+PLALGLL SNP++ +MD LS+L Sbjct: 531 GSCDPELSTLFVQTLIQRGTAA-SESHARFLHLGLGLLYLGKQDAAELALETLKAIEGKGGEYARLTVEACAYAGTGNVLKVQNMLHFCSDGQEN--PHHGLAVLSIALIAMGEELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNPRIAIMDILSKL 690
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: RPN1_YEAST (26S proteasome regulatory subunit RPN1 OS=Saccharomyces cerevisiae GN=RPN1 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.980e-12 Identity = 31/60 (51.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 308 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 AVLGIA++A+ E++G EM++R HL+ YG ++IRR VPLA+G++ +S+P++ V DTL+R Sbjct: 739 AVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTR 798
BLAST of EY684052 vs. ExPASy Swiss-Prot
Match: RPN1_CANGA (26S proteasome regulatory subunit RPN1 OS=Candida glabrata GN=RPN1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.586e-12 Identity = 31/60 (51.67%), Postives = 48/60 (80.00%), Query Frame = 2 Query: 308 AVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSR 487 AV+GIA++ M EE+G EM++R HL+ YG ++IRR VPLA+GL+ +++P++ V DTL+R Sbjct: 729 AVIGIALITMGEEIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGLVSVADPQMKVFDTLTR 788 The following BLAST results are available for this feature:
BLAST of EY684052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684052 ID=EY684052; Name=EY684052; organism=Citrus sinensis; type=EST; length=968bpback to top |