EY684049

Overview
NameEY684049
Unique NameEY684049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.606e-96
Identity = 176/203 (86.70%), Postives = 176/203 (86.70%), Query Frame = 2
Query:   41 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR 649
            MTRIKEFFTKLSESSTNQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR
Sbjct:    1 MTRIKEFFTKLSESSTNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR 203          

HSP 2 Score: 27.335 bits (59), Expect = 3.606e-96
Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 1
Query:  679 LEKMGNNALGMIKKHDLNPDMMDH*RTSNNREV 777
            +EKM +NAL MI K+  + DMM   RTSNNR++
Sbjct:  213 VEKMCSNALAMI-KNMTDTDMMIM-RTSNNRKL 243          

HSP 3 Score: 24.2534 bits (51), Expect = 3.606e-96
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:  651 DALSDGQVHV 680
            DALSDGQVHV
Sbjct:  204 DALSDGQVHV 213          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 3.290e-93
Identity = 190/268 (70.90%), Postives = 198/268 (73.88%), Query Frame = 2
Query:   41 MTRIKEFFTKLSESSTNQNISNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRGCVVRRPGSCWRRWVTMRLV*SKNMT*TRT*WIIEGLPTTGKWIK--GNPNGWVGGPAWVSPRKR 838
            MT IKEFFTKLSESS+NQNISNIP                           NSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVR  +         +  +  L   KNM  T T  +I       K  +     +GW   PAW+SP  R
Sbjct:    1 MTHIKEFFTKLSESSSNQNISNIPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHV-EKMCSNALAMIKNM--TDTDMMIMRTSNNRKLTEETSTVDGW---PAWLSPGDR 262          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.069e-51
Identity = 102/160 (63.75%), Postives = 128/160 (80.00%), Query Frame = 2
Query:  203 KNSGDNGN-----EPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRGCVVR 664
            KNS D+ +        HAI+KS+CS+T +P+LC+SAI  V + SKKVTSQKDVIE+SLNIT  AV  NY+ +++L+K R  LT REKVALHDCLET+DETLDELH AVEDLE YPNKKSL +H +DLKTL+S+A+TNQ TCLDGFSHD+A+K VR  +++
Sbjct:   47 KNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLK 206          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 2.638e-50
Identity = 99/144 (68.75%), Postives = 121/144 (84.03%), Query Frame = 2
Query:  236 HAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLL-KRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRGCVVR 664
            HAILKS CSST YP+LCFSA+AA     K++TSQK+VIE SLN+TT AV+HNYF ++KL+ KR  LT RE  ALHDCLETIDETLDELH AVEDL +YP +KSL +HADDLKTL+S+A+TNQGTCLDGFS+DDA++ VR  +++
Sbjct:   59 HAILKSVCSSTLYPELCFSAVAAT--GGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLK 200          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.233e-49
Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 2
Query:  197 SRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRGCVVR 664
            S+ N     +   HA+L+SSCSSTRYP+LC SA+  V     ++TSQKDVIE S+N+T TAVEHNYF ++KL+K R  LT REK ALHDCLETIDETLDELH+ VEDL  YP KK+L +HA DLKTL+S+A+TNQ TCLDGFSHDDA+K VR  +++
Sbjct:   43 SKANEKRTLSPSSHAVLRSSCSSTRYPELCISAV--VTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLK 197          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.351e-12
Identity = 34/133 (25.56%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  230 PHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGFS 622
            P +  +K+SC+ T YP +C  +++A  +  +   + +++   +L ++ T  +     +++L K   L  R+  A+HDCLE ++++LD + ++ ++++   + K    +    +++T +SAA+T++ TC+DGF+
Sbjct:   24 PANQFIKTSCTLTTYPAVCEQSLSAYAKTIQN--NPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFA 154          
BLAST of EY684049 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.083e-11
Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 2
Query:  245 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSL-SQHADDLKTLMSAAMTNQGTCLDGFSHDDANK 640
            LK+ CS TR+P+ C S+I+ +P  S   T  + + ++SL +    ++      +KL K T   +R K AL  C + I++ LD L+  V  +++   KK+L S   +DLKT +SA +T+  TC D       NK
Sbjct:   73 LKAICSVTRFPESCISSISKLP--SSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETE-DERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNK 202          
The following BLAST results are available for this feature:
BLAST of EY684049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PME3_CITSI3.606e-9686.70Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI3.290e-9370.90Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC4.069e-5163.75Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH2.638e-5068.75Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_ARATH2.233e-4963.06Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
21KD_DAUCA6.351e-1225.5621 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME1_ARATH1.083e-1133.83Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684049 ID=EY684049; Name=EY684049; organism=Citrus sinensis; type=EST; length=1037bp
CCATAATCTTATCTTTTGTTCTCTCTTATCGAGAAAAAAAATGACCCGCA
TAAAAGAATTCTTCACAAAACTTTCTGAATCTTCTACCAACCAAAACATT
TCCAATATTCCCAAGAAAAAAAAGAAACTATTCTTAGCTCTTTTTGCAAC
GCTACTCGTTGTCGCTGCCGTAATCGGCATTGTCGCCGGAGTGAACTCAA
GAAAAAACTCCGGCGACAACGGCAACGAGCCTCATCATGCTATCCTCAAA
TCATCATGTAGCAGCACAAGGTACCCGGACTTATGCTTTTCGGCTATTGC
TGCCGTTCCAGAGGCCTCCAAAAAGGTGACAAGCCAAAAGGACGTTATTG
AGATGTCCTTAAACATCACAACAACAGCCGTGGAACACAACTACTTCGGG
ATTCAGAAGCTCTTGAAGAGAACGAATCTCACCAAACGGGAAAAGGTTGC
TCTCCATGACTGTCTTGAGACGATCGATGAGACTCTTGATGAGTTACACA
AAGCCGTCGAGGATCTTGAGGAGTACCCGAACAAGAAATCTTTATCACAG
CATGCGGATGATCTCAAAACCCTAATGAGTGCCGCGATGACCAATCAGGG
GACGTGTCTTGATGGGTTCTCTCATGATGATGCTAATAAGCACGTGCGGG
GATGCGTTGTCAGACGGCCAGGTTCATGTTGGAGAAGATGGGTAACAATG
CGCTTGGTATGATCAAAAAACATGACTTGAACCCGGACATGATGGATCAT
TGAAGGACTTCCAACAACAGGGAAGTGGATAAAAGGAAACCCGAACGGGT
GGGTGGGGGGGCCGGCGTGGGTTTCCCCCCGGAAAAGAGGGGGGGTGGTG
GCAAGCCCCCCCTACGGGGAGAACCGGAAACGGGGGGGGGGGGAAAACAA
AAAGGCACAAGGGAAAAATTCTATTAACAATCGGGGGGCGGTGGAGCGGG
AGAGGGGCGCGCGCGCGCCCCCCCACGGGGGACGGGCCCCTCAAAACGCC
GACATAAAAATAATATTGTAGGAGAAACTGACCAAGA
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