EY684033

Overview
NameEY684033
Unique NameEY684033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length965
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.379e-20
Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 2
Query:   29 ASGKKIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF*PIL 265
            +SG  ++++   V   +SE  P   +RKCMHCE+TKTPQWR GPMGPKTLCNACGV YK GRLF EY   AS TF P L
Sbjct:  206 SSGIDLEVNGNNVDSYSSEQYP---LRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPAL 281          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA6_ARATH (GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.009e-16
Identity = 44/79 (55.70%), Postives = 48/79 (60.76%), Query Frame = 2
Query:   26 HASGK-KIKLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF*P 259
            HA  K KI L+   VS           VRKC HCE TKTPQWR GP GPKTLCNACGV ++ GRL  EY   +S TF P
Sbjct:  192 HAKKKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIP 270          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GAT14_ARATH (GATA transcription factor 14 OS=Arabidopsis thaliana GN=At5g66320 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.486e-15
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 2
Query:   77 TSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            + E+   Q  RKC HC + KTPQWRAGPMG KTLCNACGV YK GRL  EY    S TF
Sbjct:  239 SGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTF 297          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GAT13_ARATH (GATA transcription factor 13 OS=Arabidopsis thaliana GN=At5g25830 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.247e-15
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2
Query:  107 RKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            R+C+HC   KTPQWR GPMGPKTLCNACGV YK GRL  EY   AS TF
Sbjct:  219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 267          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GAT11_ARATH (GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.247e-15
Identity = 36/61 (59.02%), Postives = 41/61 (67.21%), Query Frame = 2
Query:   71 DETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            D   + G +   R+C+HC   KTPQWR GPMGPKTLCNACGV YK GRL  EY   +S TF
Sbjct:  185 DMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 245          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA2_ARATH (GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.448e-15
Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 2
Query:   68 SDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            S ET+E G    +R+C HC   KTPQWR GP+GPKTLCNACGV +K GRL  EY   +S TF
Sbjct:  169 SSETTEGG---GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTF 227          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.749e-14
Identity = 35/49 (71.43%), Postives = 35/49 (71.43%), Query Frame = 2
Query:  107 RKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            RKC HC   KTPQWRAGP GPKTLCNACGV YK GRL  EY    S TF
Sbjct:  194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTF 242          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA9_ARATH (GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.590e-14
Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 2
Query:   47 KLSVPKVSDETSEVGPTQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            K  V K + +T     TQ  R+C HC + KTPQWRAGP+G KTLCNACGV YK GRL  EY    S TF
Sbjct:  202 KKKVWKNAGQTQTQTQTQT-RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTF 269          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.689e-14
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 2
Query:  107 RKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF 253
            R+C HC   KTPQWR GP+GPKTLCNACGV YK GRL  EY   +S TF
Sbjct:  158 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTF 206          
BLAST of EY684033 vs. ExPASy Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.364e-13
Identity = 39/79 (49.37%), Postives = 44/79 (55.70%), Query Frame = 2
Query:   26 HASGKKIKLSVPKVSDETSEVGPTQA-VRKCMHCEITKTPQWRAGPMGPKTLCNACGVHYKPGRLFNEYGAGASTTF*P 259
            HA  K+    +      T E   +   VR C HCE   TPQWR GP GPKTLCNACGV +K GRL  EY   +S TF P
Sbjct:  190 HAKKKRKIHLITHTESSTLESSKSDGIVRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIP 268          
The following BLAST results are available for this feature:
BLAST of EY684033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GAT10_ARATH4.379e-2060.76GATA transcription factor 10 OS=Arabidopsis thalia... [more]
GATA6_ARATH1.009e-1655.70GATA transcription factor 6 OS=Arabidopsis thalian... [more]
GAT14_ARATH2.486e-1562.71GATA transcription factor 14 OS=Arabidopsis thalia... [more]
GAT13_ARATH3.247e-1571.43GATA transcription factor 13 OS=Arabidopsis thalia... [more]
GAT11_ARATH3.247e-1559.02GATA transcription factor 11 OS=Arabidopsis thalia... [more]
GATA2_ARATH9.448e-1559.68GATA transcription factor 2 OS=Arabidopsis thalian... [more]
GATA1_ARATH2.749e-1471.43GATA transcription factor 1 OS=Arabidopsis thalian... [more]
GATA9_ARATH3.590e-1456.52GATA transcription factor 9 OS=Arabidopsis thalian... [more]
GATA4_ARATH4.689e-1467.35GATA transcription factor 4 OS=Arabidopsis thalian... [more]
GATA5_ARATH1.364e-1349.37GATA transcription factor 5 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-D01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684033 ID=EY684033; Name=EY684033; organism=Citrus sinensis; type=EST; length=965bp
AGTACGGTCGGGATTCCGGGTCGACCACGCGTCCGGAAAAAAAATCAAAT
TGTCAGTTCCAAAAGTTTCCGATGAGACTAGTGAAGTTGGGCCAACACAA
GCGGTTAGGAAATGCATGCATTGCGAGATAACGAAGACGCCTCAATGGAG
AGCAGGGCCAATGGGGCCAAAAACCCTTTGCAATGCATGCGGTGTTCACT
ATAAGCCCGGCAGGCTCTTCAACGAATACGGGGCTGGTGCTAGCACGACA
TTCTGACCCATCCTTGCACACGCCCCTCCCCCAAGCGGCGTGCTGACAGG
GCGAGAACACACTCCCCCCGCGCCGTTCACACTCGGGACCCACCACCCAG
GGGCCAGAAGGCGACGACGCAGAGCGGAAGTCCACTCAAGGGGCACCGGG
CCGGCCCCGCCCCCCCCCGCACCGCCGGCCCGCGCCCGCGCGGCGCGGAC
CGGACACCGCCCAGAGCCCGGGCGCGCGCAAACCCCCACGGCAACCCAAG
AGCCAAAACCGGCCCCACGACACCGACACGGGAAGGCACCGCGGAGGGCC
GCGCCGGGGCGCGGGGCCCCACCGGCCGCGCAGGGAGAAGGGGACGCGGC
AGGGCCACGCACCCGCCGCCGCGCAGCGCGGAAGCGCAGGACGGAGGGCC
CCGCCCCCCCACGCCCGGCCACCCGGCCGCCACCCCCCCAGCCGCCAGCC
CGCCGCCCCGGCGCCCCCCACCCCCCGAGCCCCACCGCCGCCAGACCCCC
CAACCCCACCCACGGCTCACCGCCCAGACCGCCTCCAGCGGACCCCCCCA
GCCGCCGGCACCAACGACACACGCCACCAACACCAACCGCCAGCCCACTC
AAACCAACCACGGACGCAAGTGACCCAAAGGCACCCCGACACGAGGCCAA
CCGGCCCCCCCCACCGGCACGCCCGGCACGGCCGGGCCAACGTCGCGAGC
CCCGCCGCTCCCCTC
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