EY684026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.726e-25 Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 485 N+ ENK ICP GS NNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTGEAPWWA Sbjct: 167 NAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.167e-24 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 485 N+ ENK ICP GS NNQGRVVRGPAPLSLALAH ++++GKVVFVPWTETDFRTGEAPWW+ Sbjct: 168 NAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.827e-24 Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 485 N+ ENK ICP GS NNQGRVVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTGE PWWA Sbjct: 167 NAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.075e-23 Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 485 N+ ENK ICP GS NNQG+VVRGPAPLSLALAHA+I++GKVVFVPW ETDFRTG++PWWA Sbjct: 169 NTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 9.103e-23 Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 485 N+ ENK ICP GS NNQGRVVRGPAPLSLAL HA++++GKV+FVPW ETDFRTG+ PWWA Sbjct: 164 NAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWWA 225
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.518e-22 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = -1 Query: 303 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 485 N+ ENK +CP GS NNQG+VVRGPAPLSLAL HA++++GKVVFVPW ETDFRTG+ PWW Sbjct: 161 NAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.314e-21 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHAN--IENGKVVFVPWTETDFRTGEAPWWA 485 N ENK ICP GS N+QGRVVRGPAPLSLALAH + +E+GKVVFVPW ETDFRTG+APWW+ Sbjct: 167 NQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.995e-21 Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 485 N ENK +CP GS NNQG+VVRGPAPLSLAL+H +I E GKVVFVPW ETDFRTGE PWW+ Sbjct: 168 NKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.995e-21 Identity = 47/63 (74.60%), Postives = 52/63 (82.54%), Query Frame = -1 Query: 300 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 485 N ENK +CP GS N QGRVVRGPAPLSLALAHA+I E GKV+FVPW ETDFRTG+APWW+ Sbjct: 167 NKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229
BLAST of EY684026 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.196e-19 Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = -1 Query: 303 NSVENKIICPWRGSHSNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 485 N ENK ICP GS +N G+VVRGPAPLSLALAHA + + K+ F PWTETDFRTG+ PWW Sbjct: 118 NISENKFICPCHGSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178 HSP 2 Score: 21.1718 bits (43), Expect = 2.196e-19 Identity = 7/11 (63.64%), Postives = 7/11 (63.64%), Query Frame = -3 Query: 478 HPGCRVPWKFS 510 H GC VPW S Sbjct: 110 HLGCVVPWNIS 120 The following BLAST results are available for this feature:
BLAST of EY684026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684026 ID=EY684026; Name=EY684026; organism=Citrus sinensis; type=EST; length=944bpback to top |