EY684010

Overview
NameEY684010
Unique NameEY684010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_DANRE (Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.314e-52
Identity = 92/155 (59.35%), Postives = 118/155 (76.13%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQLDVDIL++GHTH+F A++ E    INP S +GAY     ++TP+  L D     V
Sbjct:    6 LGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFEAFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_PONAB (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.112e-51
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_MOUSE (Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.112e-51
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_HUMAN (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.112e-51
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_BOVIN (Vacuolar protein sorting-associated protein 29 OS=Bos taurus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.112e-51
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:   10 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTV 164          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_RAT (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.453e-51
Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE +DYLK+L  D+H+ RG++DE   YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_CHICK (Vacuolar protein sorting-associated protein 29 OS=Gallus gallus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.453e-51
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  K+ +DYLK+L  D+HV RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:   10 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYHALENNIIPSFVLMDIQASTV 164          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_XENTR (Vacuolar protein sorting-associated protein 29 OS=Xenopus tropicalis GN=vps29 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.416e-51
Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE  DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_XENLA (Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis GN=vps29 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.416e-51
Identity = 90/155 (58.06%), Postives = 115/155 (74.19%), Query Frame = 1
Query:  169 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGDFAGPRV 633
            +GDLHIPHR + LP KFK +LVPGKIQHI+CTGNL  KE  DYLK+L  D+H+ RG++DE+  YPE K +T+GQFK+G+ HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++ E    INP S +GAY     ++ P+  L D     V
Sbjct:    6 LGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTV 160          
BLAST of EY684010 vs. ExPASy Swiss-Prot
Match: VPS29_DICDI (Vacuolar protein sorting-associated protein 29 OS=Dictyostelium discoideum GN=vps29 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.748e-49
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1
Query:  166 AIGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYQLEGGGVINPASCSGAYRTFSFDVTPALYLGD 615
            AIGD+H+PHR+  +P +FK +LVP KIQHI+CTGNL  KE+HDY K L  D+H+ RG+ DE++ YP+TK ++IGQFK G+CHGHQ++PWGD  SLA LQRQLDVD+L++GHTH    ++  G   +NP S +GA+   S DV P+  L D
Sbjct:    5 AIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVRGDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQLDVDVLISGHTHVLEVFESNGKLFVNPGSATGAFSNISNDVIPSFVLMD 154          
The following BLAST results are available for this feature:
BLAST of EY684010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
VPS29_DANRE1.314e-5259.35Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_PONAB1.112e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_MOUSE1.112e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_HUMAN1.112e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_BOVIN1.112e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_RAT1.453e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_CHICK1.453e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENTR9.416e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENLA9.416e-5158.06Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_DICDI6.748e-4956.00Vacuolar protein sorting-associated protein 29 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-A11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684010 ID=EY684010; Name=EY684010; organism=Citrus sinensis; type=EST; length=887bp
CTATGATCTACGAACTTAACTAAGAAGCCTTGCATCCTTACTTCGGCCGG
TTGCTAATTACCAATTGCTCTTGTTCCTTAAACTAATCAGACAAGAACAG
ATTATGGTGATGGGTCAATATTAAGAGAGAGATTGCTTATTTTGTTGAAG
ATGGTGTTAGTATTAGCAATCGGAGACCTTCACATTCCTCACCGTGCATC
TGACCTGCCCCAAAAGTTCAAATCTATGCTCGTTCCTGGCAAAATTCAGC
ACATCATTTGCACTGGCAATCTCTCTATCAAAGAAGTCCATGATTATTTG
AAGAGTCTTTGTCCTGATTTGCATGTCACTCGAGGTGAATATGATGAAGA
TTCACGTTATCCCGAAACTAAGACACTCACCATTGGGCAATTCAAGCTTG
GAATCTGCCATGGTCATCAGGTTATTCCGTGGGGGGACTTGGATTCGCTG
GCAATGCTGCAAAGGCAGTTGGATGTGGACATCCTTGTGACTGGTCATAC
CCATCAGTTCACAGCCTACCAACTTGAAGGTGGTGGTGTTATAAATCCTG
CCTCCTGCAGTGGCGCCTACAGGACCTTTTCATTCGATGTAACCCCGGCT
TTGTACCTCGGGGACTTTGCTGGCCCGCGAGTCGCGTTTATGTTTACTAA
TTATATGTGGGTGGAACTTCTCGTTGCCGCGTCGTCCATCGTTCGATCGC
TCCCTCTGCCCCCTCCCTTAGTCTATAGGCGCTACACCTCTTGTCTGCCC
TCTGCCCTTCTGCTAAAGCTTGTCTTTGTAATCGCTGAAACTCGGGGACA
TGCGGAATTCCACTTTTCATACGCTTGCGCACCACCACTGGCACCTTGTT
GCATACGCATGCACGCCGCCGAACCCGCCCTCCGTCC
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