EY684002

Overview
NameEY684002
Unique NameEY684002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.245e-69
Identity = 131/184 (71.20%), Postives = 153/184 (83.15%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCFIQLSYSTHPTWPIIL 554
            L  GAQKLLGILI IGE+VAYV+SGMYG V  LGAGNAILII+QL  +GIIVICLDELLQKGYG+GS ISLFIATN+CESI+WK+FSPTTIN+GRG EFEGA++ALF L+ITK +KV AL+EAFYRQNLPN+TNLLATVLVF++VVYFQGF+V LP+    ++G  G F  +        PIIL
Sbjct:  115 LFQGAQKLLGILITIGESVAYVLSGMYGDVKDLGAGNAILIIVQLFTSGIIVICLDELLQKGYGIGSAISLFIATNVCESIVWKSFSPTTINTGRGTEFEGALVALFQLMITKTDKVRALQEAFYRQNLPNVTNLLATVLVFVLVVYFQGFQVELPITPAKSKGMAGQFYPIKLFYTSNMPIIL 298          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 1.506e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata GN=sec61a PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 1.506e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: SC61A_HARAN (Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus GN=sec61a PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 1.506e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 1.506e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 2.568e-65
Identity = 124/185 (67.03%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+AV YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+AT+ VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAVVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: S61A1_DANRE (Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio GN=sec61al1 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 2.568e-65
Identity = 124/185 (67.03%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 3.354e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  +++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 3.354e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  +++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSN--IPIIL 293          
BLAST of EY684002 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 3.354e-65
Identity = 125/185 (67.57%), Postives = 154/185 (83.24%), Query Frame = 3
Query:    3 LLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGATGCF-IQLSYSTHPTWPIIL 554
            L NGAQKL G++I IG+A+ YVM+GMYG  +++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S   RG    + I+L Y+++   PIIL
Sbjct:  111 LFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSN--IPIIL 293          
The following BLAST results are available for this feature:
BLAST of EY684002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SC61A_PYRSA2.245e-6971.20Protein transport protein Sec61 subunit alpha OS=P... [more]
SC61A_PAGBO1.506e-6567.57Protein transport protein Sec61 subunit alpha OS=P... [more]
SC61A_NOTAN1.506e-6567.57Protein transport protein Sec61 subunit alpha OS=N... [more]
SC61A_HARAN1.506e-6567.57Protein transport protein Sec61 subunit alpha OS=H... [more]
SC61A_DISMA1.506e-6567.57Protein transport protein Sec61 subunit alpha OS=D... [more]
S61A2_DANRE2.568e-6567.03Protein transport protein Sec61 subunit alpha-like... [more]
S61A1_DANRE2.568e-6567.03Protein transport protein Sec61 subunit alpha-like... [more]
S61A2_MOUSE3.354e-6567.57Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_HUMAN3.354e-6567.57Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_BOVIN3.354e-6567.57Protein transport protein Sec61 subunit alpha isof... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-A03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684002 ID=EY684002; Name=EY684002; organism=Citrus sinensis; type=EST; length=954bp
CGCTCTTAAATGGGGCACAGAAGCTGTTGGGCATCCTGATTGCTATCGGT
GAGGCTGTTGCCTACGTGATGTCGGGGATGTATGGAAGTGTCAGCCAGCT
TGGTGCTGGGAATGCTATTCTCATAATCCTCCAACTTTGCTTTGCTGGAA
TCATTGTGATATGCCTGGATGAACTTCTGCAGAAGGGATATGGTTTGGGC
TCTGGGATCTCCCTTTTCATAGCCACTAACATTTGTGAAAGCATTATTTG
GAAAGCTTTTAGCCCCACAACCATAAACAGTGGCCGGGGAGCTGAATTCG
AGGGTGCTGTTATTGCTCTGTTTCATCTGCTGATAACCAAGCAAAACAAA
GTTGGGGCTCTTCGAGAGGCTTTCTATCGGCAAAACCTTCCCAATATTAC
TAATTTGCTTGCTACAGTCCTCGTATTCCTTATTGTTGTCTACTTTCAAG
GTTTCAAAGTGGTGTTGCCCGTGAGATCAAAAAATGCCCGTGGGGCAACA
GGGTGCTTTATCCAATTAAGCTATTCTACACATCCCACATGGCCTATCAT
TCTCCCAATCTGCACTTGTCTCAAAATCTGTATTTCATCTCTCAGTTTGC
TTCCTACAGAAATAACAAGGGGCAATTTTCTTTTGTTAATCCCTGGTATG
GGAAGTGGAAAAAGGAAATCTTAAATAATTTCTGGCGCCCTCCCTATTTC
AAGTTGGGTGGCCCAACCTTATTTTTGCCCCTGGCACCCAGCAAACTTTT
GGCTGAAAATGGCATCCCCCATCCTTTTCCCTTGGCTCCGTTTCTAACCT
GGGTTTTCTTATGCCTCAATGGGTTTTGGCCTCTTTTCCCCCAAAAAATT
TGAGATCAAGAANTATTCAGGGGGCACTTCCCCCCCCGCGAGACGGGCAG
CCAGCACACCCATTCTAAACGGGCGACAACAAAACGCGGGTTCTCAGCCA
GGCC
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