EY684001

Overview
NameEY684001
Unique NameEY684001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAS1 (Naphthoate synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.622e-19
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  304 KVLPRQVTTNTTKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL-----AVPIPAV 585
            K +  ++     K+TINRP+ RNAF P+TV+E+I AF  ARDD  + VIILTG+G +AFCSGGDQ +R   GY   +   RLNVL+L      +P P V
Sbjct:   12 KEIKYELYDGIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILTGEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVV 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_BACSU (Naphthoate synthase OS=Bacillus subtilis GN=menB PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.471e-18
Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL-----AVPIPAV 585
            KITINRP+  NAF P TV E+I AF DARDD +VGVI+L G G +AFCSGGDQ +R   GY   +   RLNVL+L      +P P V
Sbjct:   23 KITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVV 109          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAES (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL-----AVPIPAV 585
            K+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G +AFCSGGDQ  R   GY   ++  RLNVL+L      +P P +
Sbjct:   24 KVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVI 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAEQ (Naphthoate synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL-----AVPIPAV 585
            K+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G +AFCSGGDQ  R   GY   ++  RLNVL+L      +P P +
Sbjct:   24 KVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVI 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_HAEIN (Naphthoate synthase OS=Haemophilus influenzae GN=menB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.509e-18
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  325 TTNTTKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLN 561
            T    KITINRP+ RNAFRP TVKE++ AF+DAR D ++GVI+LTG+G +AFCSGGDQ +R    GY D      LNVL+
Sbjct:   31 TDGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLD 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAHJ (Naphthoate synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.276e-18
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL-----AVPIPAV 585
            K+TINRP+ RNAF P TV E+I AF+ ARDD ++ VIILTG+G +AFCSGGDQ  R   GY   +   RLNVL+L      +P P +
Sbjct:   24 KVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILTGEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVI 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_PASMU (Naphthoate synthase OS=Pasteurella multocida GN=menB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.276e-18
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLN 561
            KITINRP+ RNAFRP TVKE+I+AF DAR D  +GVI+LTG+G +AFCSGGDQ +R    GY D      LNVL+
Sbjct:   36 KITINRPEVRNAFRPQTVKEMIQAFADARFDEQIGVIVLTGQGEKAFCSGGDQKVRGDYGGYQDESGVHHLNVLD 110          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAAW (Naphthoate synthase OS=Staphylococcus aureus (strain MW2) GN=menB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.533e-18
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL 564
            K+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G  AFCSGGDQ  R   GY   +   RLNVL+L
Sbjct:   25 KVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDL 99          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAAS (Naphthoate synthase OS=Staphylococcus aureus (strain MSSA476) GN=menB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.533e-18
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL 564
            K+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G  AFCSGGDQ  R   GY   +   RLNVL+L
Sbjct:   25 KVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDL 99          
BLAST of EY684001 vs. ExPASy Swiss-Prot
Match: MENB_STAAR (Naphthoate synthase OS=Staphylococcus aureus (strain MRSA252) GN=menB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.245e-17
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query:  340 KITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLNL 564
            K+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G  AFCSGGDQ  R   GY   +   RLNVL+L
Sbjct:   25 KVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDL 99          
The following BLAST results are available for this feature:
BLAST of EY684001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
MENB_STAS18.622e-1949.49Naphthoate synthase OS=Staphylococcus saprophyticu... [more]
MENB_BACSU1.471e-1856.32Naphthoate synthase OS=Bacillus subtilis GN=menB P... [more]
MENB_STAES2.509e-1854.02Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_STAEQ2.509e-1854.02Naphthoate synthase OS=Staphylococcus epidermidis ... [more]
MENB_HAEIN2.509e-1858.75Naphthoate synthase OS=Haemophilus influenzae GN=m... [more]
MENB_STAHJ3.276e-1854.02Naphthoate synthase OS=Staphylococcus haemolyticus... [more]
MENB_PASMU3.276e-1862.67Naphthoate synthase OS=Pasteurella multocida GN=me... [more]
MENB_STAAW9.533e-1860.00Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAS9.533e-1860.00Naphthoate synthase OS=Staphylococcus aureus (stra... [more]
MENB_STAAR1.245e-1760.00Naphthoate synthase OS=Staphylococcus aureus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-A02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684001 ID=EY684001; Name=EY684001; organism=Citrus sinensis; type=EST; length=992bp
CCACGCGTCCGAAATCTATTAAAGCATTAGTCAGAGTGAAGAGCTTCTCA
CTGACCTTCCAAACTCCAATGGCGCCGCAAATTGATTCCGCGAGGAGAAG
AATGACCGCTGTTGCCAACCATCTTGTTCCGGTCATCAGTTCGGAATCGA
ATAGCGGTTTCATCGGGTTAAATAATGCCTCGATGAATGATAGCTATCAC
CGGATACACGGTGAAGTGCCAAGCCACGATGTCGTTTGGAGAATTGCATG
TGATGAGTCTGGCACGGAATTCACCGACATTATTTATGAAAAAGCTGTCG
GTGAAGGTATTGCCAAGGCAAGTTACTACTAATACTACTAAGATTACGAT
TAATAGGCCGGACAGAAGAAACGCGTTTCGGCCACATACAGTTAAGGAGC
TCATTCGCGCGTTTAATGATGCTAGAGATGATAGTTCCGTGGGAGTCATT
ATTCTTACCGGGAAGGGAACTGAGGCATTTTGTAGTGGTGGTGACCAAGC
ATTGAGAACCAGAGATGGTTATGCCGATTATGAAAATTTTGGCCGCCTTA
ATGTTTTAAATTTGGCGGTTCCAATTCCGGCGGTCTTCCCAAACCAGAAA
TCGCAATGGTACCCCCCTTCCTTTAATTTTGCATGGAAAATGATTCTCAT
GGGATTCCTCTGTTGGAAGGCCATGGGGTGCGATAAAAAGAATGTTGGGA
AAAAATGGCTTTATTTTGGTAGAACATTGAACCTCTAACTAGCCCGGAAA
AATACTTGCGCCTTTTGGTTTGCCCGGTTTCCCCTGCCAAAAGCACCCCA
CGTCTCAAAACAGCAACAAGTGGGTTTCAAGATTGGTTAATTTGGATTCT
TGTAGCGGGGCGACGGACCAATACGTACTCTTACCAACACAAGGCTCTGG
GTACCGCACCGTCAGTGTGTGGACAAAAACACAGTGAGGTACTACATAGA
GGAACGGAGAAAAAACAAAAAAACAAAGATGACGGAAAACAC
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