EY684000

Overview
NameEY684000
Unique NameEY684000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684000 vs. ExPASy Swiss-Prot
Match: AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.496e-13
Identity = 54/158 (34.18%), Postives = 69/158 (43.67%), Query Frame = 2 
Query:   65 AAIEYRGLNAVTNFDLSKYIKWLRXXXXXXXXXXXXXXXXXXXDDTSPIPKLNQETSSGSDTSAPPPRXXXXXXXXXXXXXXXXXXXXXXKYKEMVEKTSTDCLSTSSEPGSSHRIFPDDIQTMFFDCQDSSSYTEGDDVLLGDLNPYIFPTFYSELD 538
            AAIEYRGLNAVTNFD+S+Y+                        D+ PI   ++E  S  D  +P                         K +E++E       STS E   + R FPDDIQT +F CQDS      +DV+    N YI P FY+E D
Sbjct:  188 AAIEYRGLNAVTNFDVSRYLN-------------PNAAADKADSDSKPIRSPSREPESSDDNKSP-------------------------KSEEVIEP------STSPEVIPTRRSFPDDIQT-YFGCQDSGKLATEEDVIFDCFNSYINPGFYNEFD 300
The following BLAST results are available for this feature:
BLAST of EY684000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AP2L3_ARATH8.496e-1334.18AP2-like ethylene-responsive transcription factor ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-A01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684000 ID=EY684000; Name=EY684000; organism=Citrus sinensis; type=EST; length=941bp
CAAAAATATCTCTATCCCGTTTCTTATGCTACTCAAGAAGAAGCAGCTCA
AGCCTATGCACAGGGCAGCAATAGAGTATCGTGGACTTAATGCTGTCACC
AACTTTGATCTTAGCAAATACATTAAGTGGTTACGCCCAAATAATAATCA
AAATAACCCTAAACCTAGCAACCCTCAACAAAACCCTAATAGTGATGACA
CAAGTCCAATTCCAAAACTAAATCAGGAAACCTCAAGCGGTAGTGACACG
TCAGCACCTCCACCACGGTCTGGTGCTACCGCAGGAGGTAGCGGCTCGGC
GTCATCGGCATTAGGGCTTTTGCTACAATCGTCAAAATATAAGGAAATGG
TGGAGAAAACTTCAACAGATTGTTTATCTACGTCATCAGAACCTGGTTCT
TCACACCGGATTTTTCCTGATGATATTCAGACGATGTTTTTCGATTGTCA
GGACTCTAGCAGCTACACGGAGGGTGATGACGTTCTATTGGGTGACCTAA
ATCCATATATTTTCCCAACTTTTTATAGTGAACTTGATAATTAGAAGACG
AAGCCTGAAGCTCACTGATGAAATAAGTCACATCTTTACAATTTTACTAG
AAAAATATCTTCTTCTTTTTTTGGTTAATATTTTGAAAGCAAAGATGGTG
AATCGGGAACAAAAACAAAGAAAGAGGTACAAGGCAAAGGGACTCAATTT
CAATTTTTATTTCTTTTAATTTTCTTTCTAACTCAGAATTTTTTTTTTCC
CCCTCTACCAAAATAAGGAAAAAAAAGCTTTTGCTGGATTTTGAATTAAT
TAAGTTCATTTAACATGAAAAAACCTGGTTGGAACGCCCCAATTCGTTTA
TCCACATAAATTTAAGTTTTAAAAAAAAATACCCTCCGGGGCTTGGGAAG
GGGCCCTCCACTTTAATTATTAAAAAAACAAAAAAAAAAGG
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