EY683993

Overview
NameEY683993
Unique NameEY683993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY683993 vs. ExPASy Swiss-Prot
Match: Y5010_ARATH (Uncharacterized protein At5g50100, mitochondrial OS=Arabidopsis thaliana GN=At5g50100 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.891e-51
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1 
Query:   19 MAVRGAAAIACTT---RGRNPFVSSANHYFFMRIHHSPSRSFQRFTSNPDNRSGYINQIRAIQGATADPLTSKKEYDKDPSPENWKIKMLYDGDCPLCMQEVNMLKERNKQYGTIKFVDISSDEYSIEENQGLDYKTVMGSIHAIVSDGTVVTDVKAFRRLYEEVGLGWVYAITRYEPV 546
            MA RGA A A +T     RNP + S + +F    +H    +            G+  Q+RAIQG + DP+ +  +  ++P P+NWKIKMLYDGDCPLCM+EVNML ERN+++GTIKFVDISS++YS E+NQGLDYKTVMG IHAI SDG VV  V+AFRRLYEEVGLGWVY IT++EP+
Sbjct:    1 MATRGAVAAAASTIWKHRRNPSLRSLSRHFNPNFNHRIIPT------------GFKYQVRAIQGTSTDPVITPLKNREEPKPQNWKIKMLYDGDCPLCMREVNMLMERNEKHGTIKFVDISSNDYSPEDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLGWVYTITKFEPI 167
The following BLAST results are available for this feature:
BLAST of EY683993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5010_ARATH4.891e-5156.98Uncharacterized protein At5g50100, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-H06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683993 ID=EY683993; Name=EY683993; organism=Citrus sinensis; type=EST; length=977bp
CCACGCGTCCGAACAGAAATGGCTGTAAGAGGAGCTGCTGCAATTGCATG
CACCACAAGAGGAAGAAACCCGTTTGTCTCATCAGCAAATCATTATTTTT
TTATGAGGATTCATCACTCTCCTTCACGTTCGTTCCAAAGATTCACATCA
AATCCCGACAACCGTTCTGGATATATAAATCAAATTCGTGCAATCCAGGG
GGCCACTGCGGACCCCTTAACTTCCAAGAAAGAATATGATAAGGATCCAT
CACCAGAGAACTGGAAAATTAAAATGCTTTATGATGGAGATTGCCCTCTC
TGCATGCAAGAGGTTAACATGCTAAAGGAGAGGAATAAACAATATGGGAC
TATAAAGTTTGTTGATATAAGTTCAGATGAGTACTCTATTGAGGAGAATC
AAGGCCTAGACTACAAAACTGTTATGGGAAGTATTCATGCGATCGTTTCG
GATGGCACTGTAGTCACTGACGTCAAAGCATTTAGAAGATTGTACGAAGA
AGTTGGCCTTGGATGGGTCTATGCAATTACTAGATATGAACCTGTAAGTC
TTCATATCCATTGTGTTGGTATGTTTATTTCAGAAACTTGGGTTTAACCA
AAAAAAATTGTTGGTAATCCCGTCTTGTTCATTTTTGTTTTCCAATTTTT
TTTTTTTAAATGGGAAGCAAGGAATATGCAGATTGCCCAAATATCTGATT
TTTGTTTATAGTGGTTGGGGGCTAATTAACTTCTGCGAATCGCAGGTAAA
ATTCTTGCATTATAAGGAAATTTCACCTTTAAATTTTCGAATTTGTTTTT
TAGTTTCTTGGGTTTGGCCGAGCCCAAAAAAAAAGCTATAGGGGGGAAAA
ATCCTTGGGTTGGGCGGCAAATAAAAGAGAATTTTTTTTTCCGAAACCCT
TTTTTCGGGAAAAATTTATTGAAAACCAAAACACAACACCCCCATTTGGG
GAACCCCCAATTGAACCCTCTTCCAAA
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