EY683983

Overview
NameEY683983
Unique NameEY683983
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY683983 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.970e-13
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 2 
Query:  593 GAGGDEPARTLKRPRLVWTPQLHKRFVEAVAHLGIKNAVPKLIMQLMSVDGWTRKNVANHLQ 778
            G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V G TR+NVA+HLQ
Sbjct:  225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQ 286
[Close]
BLAST of EY683983 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.028e-12
Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 2 
Query:  563 AENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVEAVAHLGIKNAVPKLIMQLMSVDGWTRKNVANHLQ 778
            ++   + G G     + + T K+PR+VW+ +LH++FV AV  LG+  AVPK I+ LMS++G TR+NVA+HLQ
Sbjct:  172 SDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQ 243
[Close]
BLAST of EY683983 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.315e-11
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 2 
Query:  593 GAGGDEPARTLKRPRLVWTPQLHKRFVEAVAHLGIKNAVPKLIMQLMSVDGWTRKNVANHLQ 778
            G   D+P    K+PR++WT +LH +F+ AV HLG++ AVPK I+ LM+VD  TR+NVA+HLQ
Sbjct:  172 GNDNDDPTAQ-KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232
[Close]
BLAST of EY683983 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.242e-11
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 2 
Query:  608 EPARTLKRPRLVWTPQLHKRFVEAVAHLGIKNAVPKLIMQLMSVDGWTRKNVANHLQ 778
            E + +LK+PR+VW+ +LH++FV AV  LG+  AVPK I+++M+V G TR+NVA+HLQ
Sbjct:  209 EDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQ 265
The following BLAST results are available for this feature:
BLAST of EY683983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ARR1_ARATH6.970e-1356.45Two-component response regulator ARR1 OS=Arabidops... [more]
ARR18_ARATH2.028e-1245.83Two-component response regulator ARR18 OS=Arabidop... [more]
ARR10_ARATH1.315e-1153.23Two-component response regulator ARR10 OS=Arabidop... [more]
ARR2_ARATH2.242e-1154.39Two-component response regulator ARR2 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-G08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683983 ID=EY683983; Name=EY683983; organism=Citrus sinensis; type=EST; length=983bp
CCACGCGTCCGGAAAAAAATGAAAAAAAAAATAAAAGCATCAGCAACAGT
AGCCCTCAATAAAAGCTGAAAAGAAGAATACAAGATCCACCTCGATCCTC
TCTCCACTCTCTCAATTCCTCCCCGCCACCACCGCCACCACCGTAACGAT
AACCAACCCTTTTCACCATTTTAGCTGATTTTTGATGCATCAGTTTTTGT
TTTAATTTTCTTTTTCTTTTTAGTAAATAAATCAGAGAAAAAGTTAATTG
AATTGAGTTTTGAATTTCGAGATAAAAAGAGTGTCACAAATAATGAGAGA
GGACGACTCAAATTGGTTCGCAAGATGGGAAGAAGATCTTCCCTCCTATG
AAGAGCTTATACCTCTCTCTCAAACCCTAATCAGTCCTGATCTCGCTGTT
GCTTTCGATATCCGAAACCCCGTCAACGGCAACGGCAACGGCAACGGCAA
CGCCCTTTCGCAGCACCAGCAACTTCAACAGCAACAACCACTCACTCCGA
CCAACAATAACAACAACAGCAATAGCAACAACAACAACCCACTTGGGCAG
TCTGATTTTGCTGCCGAGAACTCGGCCGAGATGGGCTCAGGTGGCGCGGG
TGGCGACGAGCCCGCTCGTACCCTGAAACGGCCCCGCCTCGTCTGGACGC
CGCAGCTCCATAAAAGATTCGTGGAAGCTGTGGCTCATTTGGGGATCAAA
AATGCCGTTCCCAAACTAATAATGCAATTGATGAGTGTTGATGGGTGGAC
AAGGAAAAACGTTGCTAATCATCTACAAAATAACGGCTTTATCTTAAAAA
AAAGGCAGGGTTGGTCCGGGGGAAGGGGGGGGGGGAAGCGGGGGGGGTAA
AAGGGGGGGGGTTTCCGGGGGGGCCGGGGGGGCAAACCGGATATCGGGTT
ACAGACACCCTTTGGTTTGAAAATCAACACCGGGGTCCCGGCTATTTTTT
ATATTGGCAACCGGGGGGGGACTTGGGGGAGGA
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