EY683978

Overview
NameEY683978
Unique NameEY683978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY683978 vs. ExPASy Swiss-Prot
Match: COMA2_BACSU (Putative esterase comA2 OS=Bacillus subtilis GN=yuxO PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 3 
Query:  231 LKAIGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASMGAH--MASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQVRLWKVKE 539
            L+A+G E+ E T ER +    V   + QPF  LHGG S  +AE+ AS GA   +    +   G+++  NHLKS + G  V+A+A P+++G+T  V+ + ++  +E
Sbjct:    8 LEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALAETAASAGAQNLIDHTTQACVGLEINANHLKSVKEG-TVKAIAEPVHIGRTTIVYHIHIYDEQE 111
[Close]
BLAST of EY683978 vs. ExPASy Swiss-Prot
Match: Y1161_HAEIN (Putative esterase HI1161 OS=Haemophilus influenzae GN=HI1161 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.187e-11
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:  240 IGFELEELTPERIIGCFRVTQNSCQPFKVLHGGVSALIAESLASM-GAHMASGFKRVAGVQLTINHLKSAELGDLVRAVATPINLGKTIQVWQV 518
            +G E+     + I     V   + QPF VLHGGVS  +AE++ S+ G+      K V G+ +  NHL+    G  V A ATPINLG+ IQVWQ+
Sbjct:   24 LGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQI 116
The following BLAST results are available for this feature:
BLAST of EY683978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COMA2_BACSU1.365e-1136.19Putative esterase comA2 OS=Bacillus subtilis GN=yu... [more]
Y1161_HAEIN5.187e-1141.49Putative esterase HI1161 OS=Haemophilus influenzae... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-G03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683978 ID=EY683978; Name=EY683978; organism=Citrus sinensis; type=EST; length=1015bp
CCACGCGTCCGGAGCTGACCTTTCTCTCTGATGAGAGCAGAGCAATAATG
ACTCTTTCTACTAAGTAAACGAAAGCAAAAACACGTTGCTCGTTTCGGCT
GTTGTACCTACCACCCACCACCTACCACGTACCAGCAGCAGCGCTGAGCG
TTCAACACCGTACCATGGAGAATTCATCATCATCATCAAATTCAAAGCAG
AGAAAGAGCATTGCAGTTCCAGATGCTCCGTTGAAGGCAATTGGGTTTGA
ACTTGAGGAATTAACCCCTGAAAGAATCATCGGCTGCTTCCGGGTTACCC
AAAACTCGTGTCAGCCATTTAAGGTGTTGCATGGGGGAGTATCGGCGTTG
ATAGCAGAGTCATTGGCGAGCATGGGGGCCCACATGGCATCTGGTTTCAA
AAGAGTAGCTGGTGTTCAGCTGACCATCAATCACTTGAAGAGCGCTGAGC
TTGGCGACCTTGTCCGTGCTGTTGCCACCCCCATCAATCTTGGAAAGACC
ATTCAGGTTTGGCAAGTTCGTCTTTGGAAAGTAAAAGAAGTACAATCTGA
TGATGGTCGCGATCATGATGCTGATCATCATCATCATAATAATTCTACTT
CTTCTTCTTCTTCTATTATGATTTCTTCCTCCCCCGTTACTCTCCTATGC
AACCTCCCTGTCCCTGATCATGCTAAACATGCAAGAGATGCTCTCAAGAA
ACTCTGCCCGCAACTGTGAAATACATATATATATAAAAATCAAATATGTA
AAAATTTCCCTTTTAATTTCCCTTTTTTCCCCCAATTTTTCAAATTTCCC
TGGAACTTTGGAATCAACGCCAATGCAATGGCCCACTTTTTTGTGTTTTT
TAAAAAAAAAAAAAAAAAGGGGGGGGGCCGCCCAAAAAGAATCCAAAGCC
TTAACTAAACCGCGGGCATGGGCAACGCTCCAAAACCTCTTTTTTAAAGT
GGGCCCCCCAAAAAATTTAATTTTACCGGGGGGGGCCTTTGATTTTTTAC
AAACACAGGCGCGGG
back to top