EY683969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 8.095e-72 Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AYRKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLV+KW TLIEA+VDVKTTD Y LR+FCIGFTKR PNQVKRTCYAQASQI+ Sbjct: 28 DWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIR 162 HSP 2 Score: 48.1358 bits (113), Expect = 8.095e-72 Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKM EIM S LV KFI E++GK+ +++AT + PL F + K LKAPKF+ LGK+ V G+Y+ Sbjct: 159 SQIRQIRRKMVEIMANQASSC-DLKELVSKFIPEVIGKE-IEKATSSIFPLQN--VFVRKVKILKAPKFD-LGKLM-EVHGDYA 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 8.096e-72 Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F RNVGKTLVTRTQGTKIASEGLKHRVFEVSL DL N+E+H+YRKIRLRAEDVQGKNVLTNFWGMD TTDKLRSLV+KW +LIEA+VDVKTTDN+TLRMFCIGFTK+ NQVKRTCYAQ+SQIK Sbjct: 28 DWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIK 162 HSP 2 Score: 48.9062 bits (115), Expect = 8.096e-72 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 ++++QIRRKMREIM+ LV+KFI E +G++ +++AT + PL F + K LKAPKF+ +GK+ V G+YS Sbjct: 159 SQIKQIRRKMREIMVTQAQTC-DLKELVQKFIPESIGRE-IEKATSSIYPLQNVFI--RKVKILKAPKFD-IGKLM-EVHGDYS 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.056e-71 Identity = 116/135 (85.93%), Postives = 128/135 (94.81%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E++A+RKIRLRAEDVQGKNVLTNF+GMDFTTDKLRSLVRKW TLIEA+VDVKTTDNYTLRMFCIGFTKR NQVKRTCYAQ+SQI+ Sbjct: 28 DWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIR 162 HSP 2 Score: 50.447 bits (119), Expect = 1.056e-71 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKMREIM+ + LV KFI E++GK+ +++AT + PL F + K LK+PKF+ LGK+ V G+YS Sbjct: 159 SQIRQIRRKMREIMVNQATSC-DLKELVRKFIPEMIGKE-IEKATSSIYPLQNVFI--RKVKILKSPKFD-LGKLM-EVHGDYS 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4) HSP 1 Score: 240.35 bits (612), Expect = 1.960e-70 Identity = 113/135 (83.70%), Postives = 126/135 (93.33%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F VRNVGKTLVTRTQGTKIASEGL+HRVFE+SL DL +E+H++RKIRLRAED+QGKNVLTNFWGMDFTTDKLRSLVRKW +LIEA+VDVKTTD+YTLRMFCIGFTK+ NQ KRTCYAQ+SQI+ Sbjct: 28 DWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIR 162 HSP 2 Score: 48.1358 bits (113), Expect = 1.960e-70 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKMREIM+ LV+KFI E +G++ +++AT + PL F + K LKAPKF+ LGK+ V G+Y+ Sbjct: 159 SQIRQIRRKMREIMVNQAQSC-DLKDLVQKFIPESIGRE-IEKATSSIYPLQNVFI--RKVKILKAPKFD-LGKLM-EVHGDYN 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.184e-69 Identity = 113/135 (83.70%), Postives = 124/135 (91.85%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E+ AYRKIRLRAEDVQG+NVLTNFWGMDFTTDKLRSLVRKW TLIEA+VDVKTTDNYTLR+FCI FTK+ NQ K+TCYAQ+SQI+ Sbjct: 28 DWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIR 162 HSP 2 Score: 46.595 bits (109), Expect = 6.184e-69 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKMREIM + LV+KFI E +G++ +++AT + PL + + K LKAPKF+ LGK+ V G+YS Sbjct: 159 SQIRQIRRKMREIMTNMATSC-DLKELVKKFIPESIGRE-IEKATSSIYPLQNVYI--RKVKILKAPKFD-LGKLM-EVHGDYS 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.788e-68 Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+ ++RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLV+KW TLIEA+VDVKTTD+YTLRMFCI FTK+ PNQ KRTCYAQ+SQI+ Sbjct: 28 DWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIR 162 HSP 2 Score: 43.1282 bits (100), Expect = 1.788e-68 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKM EIM S LV KFI E +G++ +++AT + PL + + K LKAPKF+ +GK+ V G+YS Sbjct: 159 SQIRQIRRKMVEIMRNQASSC-DLKELVAKFIPESIGRE-IEKATSSIFPLQNVYI--RKVKILKAPKFD-IGKLM-EVHGDYS 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota GN=cyc07 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 5.641e-67 Identity = 112/135 (82.96%), Postives = 124/135 (91.85%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAP+ F+ +NVGKTLV+RTQGTKIASEGLKHRVFEV L DL +E+ AYRKIRLRAEDVQGKNVLTNF+GMDFTTDKLRSLVRKW TLIEA+VDVKTTD+YTLRMFCIGFTK+ NQ KRTCYAQ+SQI+ Sbjct: 28 DWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEGLKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIR 162 HSP 2 Score: 44.2838 bits (103), Expect = 5.641e-67 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 529 ARLRQIRRKMREIMICSGSIV*S*GALVEKFIAEIMGKKRLKRATFNHIPLTKRFFFPKSEKSLKAPKFESLGKVEGRVQGNYS 780 +++RQIRRKM EIM S LV KFI E +G++ +++AT + PL F + K LKAPKF+ +GK+ V G+YS Sbjct: 159 SQIRQIRRKMVEIMRNQASSC-DLKELVAKFIPESIGRE-IEKATSSIFPLQNVFI--RKVKILKAPKFD-IGKLM-EVHGDYS 236
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 5.946e-63 Identity = 116/135 (85.93%), Postives = 125/135 (92.59%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+HAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKW TLIEA+VDVKTTDNYTLRMFCI FTK+ NQ K+T YAQ+SQI+ Sbjct: 28 DWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKKRQNQNKKTSYAQSSQIR 162
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 1.121e-61 Identity = 139/243 (57.20%), Postives = 164/243 (67.49%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK------TDSPQDEGDHDLLRQ--HRVILRGFGRKIHCXXXXXXXXXXXXL*PYTPYKKVFLPQK*KIFESS*I*IFGKS*REGPGELLLKDVGLKRKRPA*RTPFPEP 839 DWYD+KAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E++AYRKIRLRAEDVQG+NVLT FWGMDFTTDKLRSLV+KW TLIEA+VDVKTTD YTLRMFCI FTKR NQVKRTCYAQ+SQI+ ++ E L++ + I GR+I P + VF+ +K KI ++ + GK E G+ +DVG+K RPA T EP Sbjct: 28 DWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIY-----------PLQNVFI-RKVKILKAPKFDL-GKL-MEVHGDYTAEDVGVKVDRPADETMVEEP 256
BLAST of EY683969 vs. ExPASy Swiss-Prot
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 2.498e-61 Identity = 113/135 (83.70%), Postives = 124/135 (91.85%), Query Frame = 3 Query: 135 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLHNEEEHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWHTLIEAYVDVKTTDNYTLRMFCIGFTKRLPNQVKRTCYAQASQIK 539 DWYDIKAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL+ +E+ AYRKIRLRAEDVQG+NVLT FWGMDFTTDKLRSLV+KW TLIE++VDVKTTDNYTLR+FCI FTKR NQVKRTCYAQ+SQI+ Sbjct: 28 DWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIR 162 The following BLAST results are available for this feature:
BLAST of EY683969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY683969 ID=EY683969; Name=EY683969; organism=Citrus sinensis; type=EST; length=1026bpback to top |