EY683962

Overview
NameEY683962
Unique NameEY683962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 1.041e-77
Identity = 150/248 (60.48%), Postives = 182/248 (73.39%), Query Frame = 3
Query:    3 DSPDLPLDHDLAVAQKERDPDPAILGRLSEKLHLRTINDLKNESLAFHELVISSGGDPGDCFEEISSLLRKLKDFVLIENPEVDITEGEKGLMKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKK-PGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKL 743
            +  DL L HDLA+A+   DPDP IL RLS++L L TI++LK ES A HE  +S  GDP DCFE +SSLL+ L DFV +E+ + D + G + + +HRSPVIP+ FRCPISLELMKDPVIVSTGQTYERS IQKWLDAGHKTCPK+Q+TLLH  LTPNYVLKSLIALWCE+NG+ELP+NQG+CR+ K  G+  SDCDR  + +LL KL NG   +++    E  R   K        IAE GAIPLL +L
Sbjct:  149 EESDLQLSHDLAMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESSDPDPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGE-LRLLAKRNVDNRVCIAEAGAIPLLVEL 395          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 2.847e-59
Identity = 134/254 (52.76%), Postives = 164/254 (64.57%), Query Frame = 3
Query:    3 DSPDLPLDHDL-AVAQKERDPDP--AILGRLSEKLHLRTINDLKNESLAFHELVISSGG-DPGDCFEEISSLLRKLKDFVLIENPEVDITEGEKGLMKH---RSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKL 743
            D PD    +DL +V  K  DP    AILGRLSEKLHL TI DL  ESLA HE+V S GG DPG+  E +S LL+K+KDFV  +NP++      + L  +   R   IPD+FRCPISLELMKDPVIVSTGQTYER+CI+KW+ +GH TCP TQQ +  +ALTPNYVL+SLI+ WCE NG+E PK   + +  KP    S  +RA I+ALL KL + +   ++    E  R   K  A     IAE GAIPLL  L
Sbjct:  167 DMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKR--STQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE-LRLLAKRNANNRICIAEAGAIPLLLSL 417          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 2.847e-59
Identity = 134/254 (52.76%), Postives = 164/254 (64.57%), Query Frame = 3
Query:    3 DSPDLPLDHDL-AVAQKERDPDP--AILGRLSEKLHLRTINDLKNESLAFHELVISSGG-DPGDCFEEISSLLRKLKDFVLIENPEVDITEGEKGLMKH---RSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKL 743
            D PD    +DL +V  K  DP    AILGRLSEKLHL TI DL  ESLA HE+V S GG DPG+  E +S LL+K+KDFV  +NP++      + L  +   R   IPD+FRCPISLELMKDPVIVSTGQTYER+CI+KW+ +GH TCP TQQ +  +ALTPNYVL+SLI+ WCE NG+E PK   + +  KP    S  +RA I+ALL KL + +   ++    E  R   K  A     IAE GAIPLL  L
Sbjct:  167 DMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKR--STQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE-LRLLAKRNANNRICIAEAGAIPLLLSL 417          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 8.870e-53
Identity = 122/259 (47.10%), Postives = 157/259 (60.62%), Query Frame = 3
Query:    3 DSPDLPLDHDL-AVAQKERDPDP--AILGRLSEKLHLRTINDLKNESLAFHELVISSGGDPGDCFEEISSLLRKLKDFVLIENP-----EVDITEGEKG----LMKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKL 743
            D  D  L  DL ++  K  D D    +L R+++KLHL  I DL  ES+A HE+V SSGGD G+  EE++ +L+ +KDFV  E+      +V +     G        + PVIPDDFRCPISLE+M+DPVIVS+GQTYER+CI+KW++ GH TCPKTQQ L  T LTPNYVL+SLIA WCE N +E PK   + R +K  +  S  +   IE L+ +L  GN   ++    E  R   K  A     IAE GAIPLL  L
Sbjct:  145 DVSDDELYEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE-IRLLAKRNADNRVAIAEAGAIPLLVGL 402          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.465e-47
Identity = 114/236 (48.31%), Postives = 144/236 (61.02%), Query Frame = 3
Query:   81 RLSEKLHLRTINDLKNESLAFHELVISSGGD-PGDCFEEISSLLRKLKDFVLIENPEVDIT--EGEKGLMKHRSP-----VIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVS---DCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKLFIIN 755
            R++EKL L TI DL  ESLA  ++V SSGGD PG+ FE++S +L+K+KDFV   NP +D      +  L K R       + P++FRCPISLELM DPVIVS+GQTYER CI+KWL+ GH TCPKTQ+TL    +TPNYVL+SLIA WCE+NG+E PK     +     +  S   D +   IE LL KLT+     ++    E  R   K        IA  GAIPLL  L  I+
Sbjct:  175 RVAEKLQLMTITDLTQESLALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAAGE-IRLLAKQNNHNRVAIAASGAIPLLVNLLTIS 409          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.505e-39
Identity = 98/262 (37.40%), Postives = 148/262 (56.49%), Query Frame = 3
Query:    3 DSPDLPLDHDLAVAQKERDP---DPAILGRLSEKLHLRTINDLKNESLAFHELVISSGGDPGDCFEEISSLLRKLKDFVLIENPEVDITEG-EKGLMKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKL--FIINGILEN 770
            D+ D+ L  D+ V   + DP   D AI+ RL++KL L+TI+DLK E++A   L+   GG   +  + I  LL K K    +E  ++       K + K  S ++P +F CPI+LE+M DPVI++TGQTYE+  IQKW DAGHKTCPKT+Q L H +L PN+ LK+LI  WCE N  ++P+ + +  S+          +  +  L+  L++     ++   ++  R   +   +    IA  GAIPLL +L  +  +GI EN
Sbjct:  187 DTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNE-------QKDEVSLLVEALSSSQLEEQRRS-VKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQEN 440          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.020e-32
Identity = 83/185 (44.86%), Postives = 107/185 (57.84%), Query Frame = 3
Query:  237 ENPEVDITEGEKGLMKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDC--DRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKLFIINGILENRNMGV 785
            E  E  +TE      K  +  IP+DF CPISLELMKDP IVSTGQTYERS IQ+W+D G+ +CPKTQQ L +  LTPNYVL+SLI+ WC  + +E P      R+K       D   D +AI AL+ KL++ +   ++  + E  R   K        IAE GAIP+L KL   +G  E +   V
Sbjct:  222 ERLEKAVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSE-IRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAV 405          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.800e-29
Identity = 72/159 (45.28%), Postives = 95/159 (59.75%), Query Frame = 3
Query:  300 IPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELPKNQGACRSKKPGTCVSDCDRAAIEALLGKLTNGNCGRKKEPLLESSRCWPKGMAKKEWWIAEPGAIPLLCKLFIINGILENRN 776
            IP DF CP+SLELMKDPVIV+TGQTYER+ IQ+W+D G+ TCPKTQQ L +  LTPNYVL+SLI+ WC  + +E P      R+K  G      D + I AL+ +L++ +   ++  + E  R   K        IAE GAIP+L  L     +    N
Sbjct:  241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSG------DMSVIRALVQRLSSRSTEDRRNAVSE-IRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQEN 392          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.419e-26
Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  294 PVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELP 527
            P+ P++ RCPISL+LM DPVI+++GQTYER CI+KW   GH +CPKTQQ L H +LTPNY +K LIA WCE NG+ +P
Sbjct:  273 PIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVP 350          
BLAST of EY683962 vs. ExPASy Swiss-Prot
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.577e-25
Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 3
Query:  294 PVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCENNGVELP 527
            PV P++ RCPISL+LM DPVI+++GQTYER CI+KW   GH TCPKTQQ L H +LTPN  +K LIA WCE NG ++P
Sbjct:  270 PVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIP 347          
The following BLAST results are available for this feature:
BLAST of EY683962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PUB14_ARATH1.041e-7760.48U-box domain-containing protein 14 OS=Arabidopsis ... [more]
SL11_ORYSJ2.847e-5952.76Protein spotted leaf 11 OS=Oryza sativa subsp. jap... [more]
SL11_ORYSI2.847e-5952.76Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
PUB13_ARATH8.870e-5347.10U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB12_ARATH1.465e-4748.31U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB15_ARATH2.505e-3937.40U-box domain-containing protein 15 OS=Arabidopsis ... [more]
PUB10_ARATH1.020e-3244.86U-box domain-containing protein 10 OS=Arabidopsis ... [more]
PUB11_ARATH1.800e-2945.28U-box domain-containing protein 11 OS=Arabidopsis ... [more]
PUB6_ARATH5.419e-2662.82U-box domain-containing protein 6 OS=Arabidopsis t... [more]
PUB7_ARATH1.577e-2564.10U-box domain-containing protein 7 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-E11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683962 ID=EY683962; Name=EY683962; organism=Citrus sinensis; type=EST; length=976bp
CAGACTCACCTGATTTGCCACTGGATCATGATTTAGCTGTAGCACAGAAA
GAAAGAGACCCAGACCCTGCAATATTAGGAAGACTTTCAGAAAAACTGCA
TCTTAGAACCATCAACGATTTGAAAAATGAGTCCCTTGCTTTTCATGAAT
TGGTCATTTCAAGTGGTGGAGATCCTGGGGACTGTTTTGAGGAGATATCA
TCCCTGCTAAGGAAGCTAAAAGACTTTGTGCTGATTGAAAACCCTGAAGT
TGACATCACTGAGGGTGAGAAGGGCTTGATGAAACACAGATCCCCTGTTA
TCCCAGATGATTTTCGATGCCCAATTTCACTAGAATTGATGAAAGATCCT
GTAATTGTCTCCACTGGACAGACATATGAAAGATCCTGCATCCAGAAGTG
GTTGGATGCGGGGCACAAGACCTGTCCGAAAACACAGCAGACACTGCTGC
ATACTGCCCTAACACCTAACTACGTTTTGAAGAGTCTGATTGCTTTGTGG
TGTGAGAACAATGGTGTTGAGCTTCCTAAAAATCAAGGGGCCTGTAGAAG
CAAAAAGCCAGGAACCTGTGTTTCTGATTGTGATCGTGCTGCTATTGAAG
CCTTGTTAGGGAAATTAACAAATGGGAATTGTGGAAGAAAAAAAGAGCCG
CTGCTGGAAAGCTCAAGGTGCTGGCCAAAAGGAATGGCAAAAAAAGAGTG
GTGGATTGCTGAACCAGGAGCCATTCCACTACTTTGTAAACTTTTTATCA
TCAACGGGATCCTCGAAAACAGGAACATGGGTGTTAACACCACTTCCCCA
CCCCTTTTCCAATAAGGGATTATAAAAGGGGAAACAATGGTAAGACCAGG
GACCTTTCCGTGAAAAATAAAAGAGATGTGGTAAAAAAAAGAGGGATTTG
TGGAAAGGGGAAAGAAAAAAAAGGAAACAGCACAACCACCAATTACGGAT
TTGGAGCGGGGATTTAGGGGAGAAAA
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