EY683960

Overview
NameEY683960
Unique NameEY683960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1011
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_DICDI (Protein transport protein SEC23 OS=Dictyostelium discoideum GN=sec23 PE=3 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.495e-58
Identity = 108/195 (55.38%), Postives = 142/195 (72.82%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSFHSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDA-QIPG-GDIIFTDDVSFEVFLDHLQRLAVQ 583
            F+L+S+F I+P FMFHLRRS F+QVFN+SPDE++++R +LNRENV+NS++MIQP+L  YSF   P P                 ++F V+IFHG TIAQWRKAGY   P+HQ F  LLQAP DDA  I+KERFP PR ++CDQH  +ARFLLA ++P+ T+ S+  Q P  G+I+FTDDV+  VFL+HL++ AVQ
Sbjct:  555 FKLVSNFSIYPHFMFHLRRSSFLQVFNSSPDESSFYRFMLNRENVSNSLIMIQPTLEKYSFSGPPHPEVLSASSISIDSILLLDTFFHVLIFHGETIAQWRKAGYDKDPQHQNFRDLLQAPRDDAAHILKERFPYPRYIVCDQHSGEARFLLATIDPNITHTSNTPQDPSKGEIVFTDDVNLHVFLEHLKKFAVQ 749          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_CRYNE (Protein transport protein SEC23 OS=Cryptococcus neoformans GN=SEC23 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.386e-56
Identity = 108/196 (55.10%), Postives = 139/196 (70.92%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSFHSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATY----NSDAQIPGGDIIFTDDVSFEVFLDHLQRLAV 580
            FQL  +F I+PQFMFHLRRSQF+QVFNNSPDETA++R +LN  +V NS++MIQP+L+SY F S P P                 ++F ++IFHG TIAQWRKA Y  Q ++  F +LL+AP  DA  ++++R P+PR V+CDQ GSQARFLL+KLNPS T+    N  A   GG  IFTDDVS +VF++HL+RLAV
Sbjct:  563 FQLSPNFSIYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNDSDVNNSLIMIQPTLMSYGFDSEPHPVLLDSVSIRPDVILLLDTFFHILIFHGETIAQWRKANYQEQEDYANFKELLEAPIGDAQELLEDRMPIPRYVVCDQGGSQARFLLSKLNPSTTHMSGSNYGAGPAGGQAIFTDDVSLQVFMEHLKRLAV 758          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_USTMA (Protein transport protein SEC23 OS=Ustilago maydis GN=SEC23 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.020e-55
Identity = 103/196 (52.55%), Postives = 140/196 (71.43%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSFHSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQI----PGGDIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F I+PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V NS++MIQP+L+SY F   P+P                 ++F ++IFHG T+AQWRKAGY +Q  ++ F ++L+ P  DA  ++ +RFP+PR ++CDQ+GSQARFLL+KLNPS T+ S          G  IFTDDVS +VF++HL+RLAV
Sbjct:  573 FRLGENFSIYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNTEDVNNSLIMIQPTLMSYGFEGPPQPVLLDSVSIRPDVVLLLDTFFHILIFHGETVAQWRKAGYQDQEGYENFKEVLENPRADAQDLLADRFPIPRYIVCDQNGSQARFLLSKLNPSTTHMSGGMYGSSGNSGAAIFTDDVSLQVFMEHLKRLAV 768          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_NEUCR (Protein transport protein sec-23 OS=Neurospora crassa GN=sec-23 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.448e-53
Identity = 104/199 (52.26%), Postives = 140/199 (70.35%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPGG------DIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V+NS++MIQP+L SY+F   G  P                 ++F ++IFHG TIA+WRKAGY +Q  ++ FA LL+ P +DA  ++ +RFP+PR ++CDQ GSQARFLL+KLNPS T+ S A   GG        IFTDDVS + F++HL +LAV
Sbjct:  573 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNHEDVSNSLIMIQPTLDSYTFDQEGGVPVLLDSTSIQPTHILLLDTFFHILIFHGETIAEWRKAGYQDQEGYENFAALLEQPKEDARDLITDRFPLPRFIVCDQGGSQARFLLSKLNPSTTHTSGAGAYGGVGAQSAQTIFTDDVSLQTFMEHLMKLAV 771          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_MAGGR (Protein transport protein SEC23 OS=Magnaporthe grisea GN=SEC23 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.225e-53
Identity = 104/199 (52.26%), Postives = 141/199 (70.85%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPGG------DIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V+NS++MIQP+L +Y+F   G +P                 ++F ++IFHG TIAQW+KAGY +Q  ++ FAQLLQ P +DA  ++ +RFP+PR ++CD  GSQARFLL+KLNPS T+ + A   GG        IFTDDVS + F+DHL +LAV
Sbjct:  570 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNHEDVSNSLIMIQPTLDTYTFDQEGGQPVLLDSASIQPTHILLLDTFFHILIFHGETIAQWKKAGYQDQEGYENFAQLLQQPKEDAMELITDRFPLPRFIVCDAGGSQARFLLSKLNPSTTHTTGAY--GGVGAQTAQTIFTDDVSLQTFMDHLMKLAV 766          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_CHAGB (Protein transport protein SEC23 OS=Chaetomium globosum GN=SEC23 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.501e-53
Identity = 102/199 (51.26%), Postives = 140/199 (70.35%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPGG------DIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +L+ E+V+NS+VMIQP+L SY+F   G +P                 ++F ++IFHG T+A+WRKAGY +Q  ++ FA LL+ P +DA  ++ +RFP+PR ++CD  GSQARFLL+KLNPS T+ S A   GG        IFTDDVS + F++HL +LAV
Sbjct:  571 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLDHEDVSNSLVMIQPTLDSYTFDQEGGQPVLLDSSSIQPTHILLLDTFFHILIFHGETVAEWRKAGYQDQEGYENFASLLEQPKEDARDLITDRFPLPRFIVCDHGGSQARFLLSKLNPSTTHTSGAGAYGGVGAQSAQTIFTDDVSLQTFMEHLMKLAV 769          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SC231_SCHPO (Protein transport protein sec23-1 OS=Schizosaccharomyces pombe GN=sec231 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 5.501e-53
Identity = 101/195 (51.79%), Postives = 138/195 (70.77%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQ--IPGGDIIFTDDVSFEVFLDHLQRLAV 580
            F+L S F ++PQFM++LRRS F+QVFNNSPDETA++R +LN E+V NS++MIQP+L S+SF H G  P                 ++F ++IFHG TIAQWR AGY NQPE+Q   +LL+AP  +A  ++ +RFP+PR ++CDQ GSQARFLL++LNPS T+N+ +    P    I TDDVS + F+ HL++LAV
Sbjct:  562 FRLSSQFTLYPQFMYYLRRSPFLQVFNNSPDETAFYRHMLNHEDVNNSLIMIQPTLQSFSFEHPGGVPVLLDAVSVKPDVILLLDTFFHILIFHGDTIAQWRNAGYQNQPEYQNLKELLEAPRVEAAELLIDRFPIPRFIVCDQGGSQARFLLSRLNPSETHNTTSMYGAPPAHAILTDDVSLQTFMSHLKKLAV 756          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_PHANO (Protein transport protein SEC23 OS=Phaeosphaeria nodorum GN=SEC23 PE=3 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 9.384e-53
Identity = 103/198 (52.02%), Postives = 139/198 (70.20%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPGG-----DIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V NS+VMIQP+L SY F H G +P                 ++F ++IFHG T+A+WRKAGY +Q  ++ F  LL+AP +DA  ++++RFP+PR ++CD  GSQARFLL+KLNPS T+ +     GG       IFTDDVS + F+DHL +LAV
Sbjct:  577 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNHEDVGNSLVMIQPTLDSYGFDHEGGQPVLLDSASIQSETVLLLDTFFHILIFHGETMAEWRKAGYQDQEGYENFRTLLEAPKEDAKDLIQDRFPLPRFIVCDAGGSQARFLLSKLNPSTTHQTSTY--GGVAQTAQTIFTDDVSLQTFMDHLMKLAV 772          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_ASPNC (Protein transport protein sec23 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec23 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 6.083e-52
Identity = 101/195 (51.79%), Postives = 136/195 (69.74%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPG--GDIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V +S+VMIQP+L SYS  H G +P                 ++F ++IFHG TIA+WRKAGY +Q  ++    LL+ P +DA  ++ +RFP+PR ++CD  GSQARFLL+KLNPS T+ +     G    IIFTDDVS + F+DHL +LAV
Sbjct:  570 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNHEDVGDSLVMIQPTLDSYSLEHEGSQPVLLDSASIQPAHILLLDTFFHILIFHGETIAEWRKAGYQDQEGYENLKVLLEQPKEDARELISDRFPLPRFIVCDAGGSQARFLLSKLNPSTTHTTGGYGGGVTSQIIFTDDVSLQTFMDHLMKLAV 764          
BLAST of EY683960 vs. ExPASy Swiss-Prot
Match: SEC23_ASPTN (Protein transport protein sec23 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec23 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.311e-51
Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 2
Query:    5 FQLISSFFIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVTNSVVMIQPSLISYSF-HSGPEPXXXXXXXXXXXXXXXXXSYFTVVIFHGATIAQWRKAGYHNQPEHQAFAQLLQAPHDDAGVIMKERFPVPRLVICDQHGSQARFLLAKLNPSATYNSDAQIPG--GDIIFTDDVSFEVFLDHLQRLAV 580
            F+L  +F ++PQFMFHLRRSQF+QVFNNSPDETA++R +LN E+V +S+VMIQP+L SYS  H G +P                 ++F ++IFHG TIA+WRKAGY +Q  ++    LL+ P +DA  ++ +RFP+PR ++CD  GSQARFLL+KLNPS T+ +     G     IFTDDVS + F+DHL +LAV
Sbjct:  573 FRLEKNFTLYPQFMFHLRRSQFLQVFNNSPDETAFYRHVLNHEDVGDSLVMIQPTLDSYSLEHEGSQPVLLDSASIQPTHILLLDTFFHILIFHGETIAEWRKAGYQDQEGYENIKALLEQPKEDARELIADRFPLPRFIVCDAGGSQARFLLSKLNPSTTHTTGGYGGGVTSQTIFTDDVSLQTFMDHLMKLAV 767          
The following BLAST results are available for this feature:
BLAST of EY683960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
SEC23_DICDI1.495e-5855.38Protein transport protein SEC23 OS=Dictyostelium d... [more]
SEC23_CRYNE2.386e-5655.10Protein transport protein SEC23 OS=Cryptococcus ne... [more]
SEC23_USTMA2.020e-5552.55Protein transport protein SEC23 OS=Ustilago maydis... [more]
SEC23_NEUCR1.448e-5352.26Protein transport protein sec-23 OS=Neurospora cra... [more]
SEC23_MAGGR3.225e-5352.26Protein transport protein SEC23 OS=Magnaporthe gri... [more]
SEC23_CHAGB5.501e-5351.26Protein transport protein SEC23 OS=Chaetomium glob... [more]
SC231_SCHPO5.501e-5351.79Protein transport protein sec23-1 OS=Schizosacchar... [more]
SEC23_PHANO9.384e-5352.02Protein transport protein SEC23 OS=Phaeosphaeria n... [more]
SEC23_ASPNC6.083e-5251.79Protein transport protein sec23 OS=Aspergillus nig... [more]
SEC23_ASPTN2.311e-5151.28Protein transport protein sec23 OS=Aspergillus ter... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-E09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683960 ID=EY683960; Name=EY683960; organism=Citrus sinensis; type=EST; length=1011bp
CTTCTTTCAGCTTATCTCCTCGTTTTTCATATTTCCTCAGTTTATGTTTC
ATTTACGGCGTTCGCAGTTTGTTCAGGTCTTTAATAACAGCCCGGATGAG
ACAGCGTATTTTAGAATGATCCTGAACCGAGAAAATGTTACCAATTCCGT
AGTGATGATTCAGCCTTCATTGATTTCTTATTCATTTCATTCAGGCCCTG
AACCTGCTCTCCTTGATGTTGCTGCCATTGCAGCCGACAGAATCCTGCTT
TTAGATTCTTACTTCACTGTTGTCATCTTTCATGGTGCAACCATTGCTCA
GTGGAGAAAAGCAGGATACCATAATCAACCTGAGCATCAGGCATTTGCAC
AGCTGCTGCAAGCTCCTCATGATGATGCCGGTGTGATAATGAAGGAAAGG
TTTCCAGTACCTCGTCTTGTCATTTGTGATCAACATGGCTCACAGGCCCG
CTTTCTTCTGGCAAAACTGAATCCTTCTGCAACTTATAACTCTGATGCTC
AAATTCCAGGAGGGGACATCATATTTACTGATGATGTTAGCTTTGAGGTC
TTTTTGGATCACCTTCAGAGATTAGCAGTTCAATGAATCCTGCATAGCCT
TTTGGGAGTTTGGTATATTTTTTTGTTGCGGAAAAATTTTTTGTACAGTT
AAGGGCATGACTTTTCTAAAAAGCCCTTTATTTTTTTTTTTTTTATTAAC
ATTTAAGGGAAATTATACGTACTTTTTTATATTTCATTTAAGTACGTGAA
CCAAAAGAACGTTGCAGGGAAGAAGCAAACTGACGAAAGAGGAAAAACAA
GCAGAGCATGAAAAGAGCAAGAAAGAACAAAACAAAAAAGAAAATGAAAG
ATAAAAATGGGTGGGTGCAACCCTATGAAAAATAACTATCAAATAAAGAC
GGAGAGGTAAGGAACAAAACAACAAAAAGCCGTATACAGAAGAAGTGGAC
ACCCTGTAATTATCATGATTAAGCCTGAGTGCGATCTACAGTATTCTAAA
TCACACGTCTG
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