EY683952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683952 vs. ExPASy Swiss-Prot
Match: DDX42_CHICK (ATP-dependent RNA helicase DDX42 OS=Gallus gallus GN=DDX42 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.930e-12 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 539 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGQTAAFTIPMIQH 691 +M I EYT+PT IQ Q +PVA+SGRD++G A+TGSG+TAAF PM+ H Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIH 314 HSP 2 Score: 27.335 bits (59), Expect = 3.930e-12 Identity = 18/57 (31.58%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 273 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMVLSLNLYHWI 443 N + + + P+Q+ E+R +LN+ V SG+ P P P SF L H I Sbjct: 216 NFYDEHEEITSLTPQQVVELRHKLNLRV---SGAAP-PRPGSSFARFGFDEQLMHQI 268
BLAST of EY683952 vs. ExPASy Swiss-Prot
Match: DDX42_PONAB (ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.930e-12 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 539 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGQTAAFTIPMIQH 691 +M I EYT+PT IQ Q +PVALSGRD++G A+TGSG+TAAF PM+ H Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIH 314 HSP 2 Score: 26.5646 bits (57), Expect = 3.930e-12 Identity = 17/57 (29.82%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 273 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMVLSLNLYHWI 443 N + + + P+Q+ ++R +LN+ V SG+ P P P SF L H I Sbjct: 216 NFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQLMHQI 268
BLAST of EY683952 vs. ExPASy Swiss-Prot
Match: DDX42_HUMAN (ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.930e-12 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 539 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGQTAAFTIPMIQH 691 +M I EYT+PT IQ Q +PVALSGRD++G A+TGSG+TAAF PM+ H Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIH 314 HSP 2 Score: 26.5646 bits (57), Expect = 3.930e-12 Identity = 17/57 (29.82%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 273 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMVLSLNLYHWI 443 N + + + P+Q+ ++R +LN+ V SG+ P P P SF L H I Sbjct: 216 NFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQLMHQI 268
BLAST of EY683952 vs. ExPASy Swiss-Prot
Match: DDX42_MOUSE (ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 3.931e-12 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 539 IMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGQTAAFTIPMIQH 691 +M I EYT+PT IQ Q +PVALSGRD++G A+TGSG+TAAF PM+ H Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIH 314 HSP 2 Score: 26.5646 bits (57), Expect = 3.931e-12 Identity = 17/57 (29.82%), Postives = 27/57 (47.37%), Query Frame = 3 Query: 273 NNWKPSDRVLRFNPEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMVLSLNLYHWI 443 N + + + P+Q+ ++R +LN+ V SG+ P P P SF L H I Sbjct: 216 NFYNEHEEITNLTPQQLIDLRHKLNLRV---SGAAP-PRPGSSFAHFGFDEQLMHQI 268
BLAST of EY683952 vs. ExPASy Swiss-Prot
Match: ROK1_YARLI (ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica GN=ROK1 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.217e-11 Identity = 26/54 (48.15%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 527 LHPSIMKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGQTAAFTIPMIQ 688 LHP ++ +++ ++YT PT IQ +++P L+GRDL+ CA TGSG+T A++IPM++ Sbjct: 118 LHPYLLANLKKNKYTDPTPIQCESIPTMLNGRDLIACAPTGSGKTMAYSIPMVE 171 HSP 2 Score: 24.2534 bits (51), Expect = 3.217e-11 Identity = 12/44 (27.27%), Postives = 23/44 (52.27%), Query Frame = 3 Query: 312 PEQIEEVRLRLNVDVTVASGSVPAPAPIESFTDMVLSLNLYHWI 443 PE+ R + +++T +P PI SF D++ NL+ ++ Sbjct: 83 PEEAVVFRNKHKINIT----GEDSPLPIGSFEDLITRFNLHPYL 122 The following BLAST results are available for this feature:
BLAST of EY683952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY683952 ID=EY683952; Name=EY683952; organism=Citrus sinensis; type=EST; length=969bpback to top |