EY683946

Overview
NameEY683946
Unique NameEY683946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1002
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 1.022e-109
Identity = 205/228 (89.91%), Postives = 222/228 (97.37%), Query Frame = 1
Query:   13 GALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANLKKELSGSSRK 696
            GA+  RMNLFDR ARVVKSYANA++S+FEDPEKILEQAVLEMNDDL KMRQATAQVLASQKRLENK KAA+QASE+WYRKAQLALQKGEEDLAREALKRRKS+ADNA++LKAQLDQQK+VV+NLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+TMESQA++L QLTTDDLEGKFA+LETSSVDDDLANLKKEL+GSS+K
Sbjct:   55 GAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMTMESQAEALGQLTTDDLEGKFAMLETSSVDDDLANLKKELAGSSKK 282          

HSP 2 Score: 25.7942 bits (55), Expect = 1.022e-109
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  690 KKGELPPERAAASSTNT 740
            KKGELPP R++ +ST +
Sbjct:  281 KKGELPPGRSSTTSTTS 297          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 8.294e-102
Identity = 196/244 (80.33%), Postives = 214/244 (87.70%), Query Frame = 1
Query:   28 RMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANLKKELSGSSRKESFHLKGLLLAAQTLPFPFRD 759
            R NL DR +RVVKSYANA+LSSFEDPEKIL+QAVLEMNDDL KMRQATAQVLASQKRLENK KAAEQAS+DWYR+AQLALQKG+EDLAREALKRRKSYADNA++LKAQLDQQK VV NLVSNTR+LESKI EA+ KKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+ MESQA++L QL TDDLEGKFALLETSSVDDDLA +KKE+SGSS K         ++      PFRD
Sbjct:   57 RSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPFRD 300          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 3.987e-96
Identity = 183/243 (75.31%), Postives = 214/243 (88.07%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSSVDDDLANLKKELSGSSRKESFHLKGLLLAAQTLPFPFRD 759
            MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMRQATAQVLASQK+L+NK KAA+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLLESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+ MES+AD+L Q+ TD+LEGKF +LETSSVDDDLA+LKKELSGSS+K         +AA T  +PF+D
Sbjct:   72 MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGALSAFEKMEEKVMAMESEADALTQIGTDELEGKFQMLETSSVDDDLADLKKELSGSSKKGELPPGRSTVAAST-RYPFKD 313          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.485e-50
Identity = 107/221 (48.42%), Postives = 153/221 (69.23%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLETSS-VDDDLANLKKELSGSS 690
            M LFDRL RVV++  N ++S  EDPEK+LEQAV++M +DLV++RQA A+ +A +KR E +     Q ++ W  +A+LAL  GEE+LAREAL R+KS  D A A + QL QQ+ +  NL  N   LE+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+ + +  +L    +E +FA LE SS V+D+LA LK  ++G +
Sbjct:    1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATSAFERMENKVLDMEATSQAAGELAGFGIENQFAQLEASSGVEDELAALKASMAGGA 221          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.445e-29
Identity = 76/223 (34.08%), Postives = 126/223 (56.50%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTD-DLEGKFA-LLETSSVDDDLANLKKELSGSSR 693
            M++FDRL+R++++  N ++S  EDP KI++QA+ +M       R   A  +A   +LE +     + + ++ +KA+ AL+ G EDLAREAL+R +++ D A     Q   Q++ V+ L +  R LE+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME +  ++ +L  D D + +   L     VDD LA LK ++  S++
Sbjct:    1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAMDAFNEMEQKVAGMEDRNKAMGELRNDQDFDAQLKDLGRDKDVDDALAALKAKVQSSNQ 223          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.680e-26
Identity = 67/217 (30.88%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLANLKKEL 678
            M +F R A +V +  NA+L   EDP+K++   + EM D LV++R  +A+ LA +K+L  + + A     +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA LK ++
Sbjct:    1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKM 217          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.680e-26
Identity = 67/217 (30.88%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLANLKKEL 678
            M +F R A +V +  NA+L   EDP+K++   + EM D LV++R  +A+ LA +K+L  + + A     +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA LK ++
Sbjct:    1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKM 217          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.680e-26
Identity = 67/217 (30.88%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQADSLNQLTTDDLEGKFALLET-SSVDDDLANLKKEL 678
            M +F R A +V +  NA+L   EDP+K++   + EM D LV++R  +A+ LA +K+L  + + A     +W  KA+LAL K  EDLAR AL  ++   D   +L+ ++    + +  +      LE+K+ E R+++  L  R Q+A ++  V   L +     A++ FE  E ++  ME++A+S +      L+ +FA L+   ++ + LA LK ++
Sbjct:    1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKM 217          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: PSPA_BACSU (Phage shock protein A homolog OS=Bacillus subtilis GN=ydjF PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.601e-20
Identity = 68/223 (30.49%), Postives = 119/223 (53.36%), Query Frame = 1
Query:   31 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNV-NTSSALSAFEKMEEKVLTMESQADSLNQLTT------DDLEGKFALLETSSVDDDLANLKKEL 678
            M++  R   ++ +  NA+L   E+PEK+++Q +  MN DL K++  TA V+A ++R + +    +   E     A  ALQ G E  AR+ L+R+ S     + L+A           +      L S I E  ++K+ +KA+   AKT  +++++  +V +TS ++SAF +ME+KV     QA+++ +L +       DL  K+    +S VDD+LA LK ++
Sbjct:    1 MSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKMHDKLVSDIGELEARKNMIKAKWAVAKTQERMNKLGASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADLSAKYDTGGSSQVDDELAALKAKM 223          
BLAST of EY683946 vs. ExPASy Swiss-Prot
Match: LIAH_BACSU (Protein liaH OS=Bacillus subtilis GN=liaH PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.454e-15
Identity = 55/197 (27.92%), Postives = 96/197 (48.73%), Query Frame = 1
Query:   85 LSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTME------SQADSLNQLT----TDDLEGKFALLETSSV 645
            L   E+P+ +L Q V +M  D+ K +Q   +      + + K + A + +     +AQLA   GEE+LA++AL   K     A   KA  +Q  + + +L      LE+K+Q+ + KK  L ARA +AK    ++     +++ SA   F ++E ++  ME        A++  +LT     DD+E +   + T S+
Sbjct:   18 LDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLAFDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQALIARANAAKAKEHMNTTFDKIDSESAYREFLRIENRIEEMEIRANYSKSAEAGTELTRKEFADDVEAEIEKMRTLSL 214          
The following BLAST results are available for this feature:
BLAST of EY683946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
IM30_PEA1.022e-10989.91Membrane-associated 30 kDa protein, chloroplastic ... [more]
IM30_ORYSJ8.294e-10280.33Probable membrane-associated 30 kDa protein, chlor... [more]
IM30_ARATH3.987e-9675.31Probable membrane-associated 30 kDa protein, chlor... [more]
Y617_SYNY31.485e-5048.42Uncharacterized protein sll0617 OS=Synechocystis s... [more]
PSPA_DEIRA1.445e-2934.08Phage shock protein A homolog OS=Deinococcus radio... [more]
PSPA_SHIFL5.680e-2630.88Phage shock protein A OS=Shigella flexneri GN=pspA... [more]
PSPA_ECOLI5.680e-2630.88Phage shock protein A OS=Escherichia coli (strain ... [more]
PSPA_ECO575.680e-2630.88Phage shock protein A OS=Escherichia coli O157:H7 ... [more]
PSPA_BACSU1.601e-2030.49Phage shock protein A homolog OS=Bacillus subtilis... [more]
LIAH_BACSU3.454e-1527.92Protein liaH OS=Bacillus subtilis GN=liaH PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-D07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683946 ID=EY683946; Name=EY683946; organism=Citrus sinensis; type=EST; length=1002bp
CCCACGCGTCCGGGAGCACTTAATACACGAATGAACCTATTTGATAGGTT
AGCAAGAGTTGTGAAGTCCTATGCAAATGCAATTCTGAGTTCCTTTGAAG
ATCCAGAGAAGATTTTAGAGCAAGCAGTACTTGAAATGAATGATGACTTG
GTAAAGATGCGCCAGGCCACGGCACAAGTGTTGGCATCTCAGAAGCGGTT
GGAAAATAAGTGCAAAGCTGCAGAGCAAGCTTCTGAAGACTGGTATCGCA
AAGCACAGCTCGCTCTTCAAAAAGGGGAAGAAGATCTGGCACGTGAGGCT
CTCAAGAGACGCAAATCTTATGCAGATAATGCTAATGCTTTGAAAGCTCA
ACTTGATCAACAAAAGAATGTTGTTAATAACCTTGTTTCTAATACTCGGC
TTTTGGAGAGCAAGATACAGGAGGCAAGATCAAAGAAAGATACTCTGAAA
GCAAGGGCTCAGTCTGCAAAGACTGCAACCAAAGTGAGCGAGATGTTGGG
GAATGTCAACACTAGCAGTGCTCTTTCAGCTTTTGAAAAAATGGAAGAGA
AAGTGTTGACAATGGAGTCCCAAGCAGATTCTCTTAACCAGTTAACTACC
GATGATCTTGAAGGAAAGTTTGCACTACTTGAGACCTCATCCGTTGACGA
TGATCTTGCAAACCTTAAAAAGGAACTATCTGGCAGCTCAAGAAAGGAGA
GCTTCCACCTGAAAGGGCTGCTGCTAGCAGCACAAACACTGCCTTTCCCT
TTTCGAGATGGGGAAATTTGAGAAGGAATTGAACGAGTTGGAGGCAAAAA
GCCAAAAAATTTTCGGAAATTTCTCCCTACACATTTGGAAAAAAGGGGTA
CCAAATTTCAAAATTCCAGGCTCAAAAATTGGAAAGAAATTTTTTGTTTT
ACCCCTACCCTTTTTGGCCCCTTGGAAAAACCCTCCCGGAGGGCCCAAAA
GGGGAAAAAAAAAACTTTTTGTTTATAAGCGGGGGGGGGGGGCCCACAAA
AA
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